Brevundimonas mediterranea: GYM46_12855
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Entry
GYM46_12855 CDS
T06564
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bmed
Brevundimonas mediterranea
Pathway
bmed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GYM46_12855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmed03400
]
GYM46_12855
Enzymes [BR:
bmed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GYM46_12855
DNA repair and recombination proteins [BR:
bmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GYM46_12855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
SelA
Motif
Other DBs
NCBI-ProteinID:
QIH73755
UniProt:
A0AB37EA97
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All DBs
Position
complement(2641275..2642876)
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AA seq
533 aa
AA seq
DB search
MSDDSYVFEGPAEAAAPRDNNPPLSISELSFALKRTLEERFGHVRLRGEVSKVNRHASGH
IYLTLKDDKSAIDGVIWKGSVRGLGVQPEAGLEVIVTGKITSYPARSSYQIVIESMEAAG
AGALLAQLERLKVRLREEGLFEPGRKKPLPQFPRTIGVITSPTGAVIRDVLHRIAERWPC
RVIVWPVVVQGEAACGQVSNAIRGFDAMTVDGPIPRPDLLIVARGGGSVEDLWCFNDEGL
ARTVAAARIPIISAVGHETDTTLIDFVSDRRAPTPTGAAEIATPVLADLRYAVADLDRRM
VLAGGRLIEDRRTRLRAVARGLPARPEDLLALAQQRLDNAASRLGSGLQRNVALHERHLA
VTGGKLSPALLRARIERGQDRLRGAGDRLGAALQAGVARGERRLLQVSARLSPAPLHRRL
DQREARLQALGARLDGVMPRRLERDADRLAGLTRALATLDPGRPKPGFARVENPDGDWIT
SAATLEAGQAVRLVFGDGARGAIIDGGDGRTASAPARPAPRPKPAAPGQGDLF
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgactcctatgtgttcgaaggcccggccgaggccgccgccccgcgcgacaac
aatccgcccctgtcgatctccgaactgtccttcgccctgaagcggacgctggaggagcga
ttcggccatgtgcggctgaggggcgaggtgtccaaggtcaatcgtcacgcctcgggccat
atctatctgaccctgaaggacgacaagtcggccatcgacggggtgatctggaagggatcg
gtgcgcggcctgggggtccagccggaggcggggctggaggttatcgtcaccggcaagatc
acctcgtatccggcgcggtcgtcgtaccagatcgtgatcgagagcatggaggcggccggc
gccggcgcccttttggcgcaactcgagcggctgaaggtccggctgcgcgaagagggcctg
ttcgagccggggcgcaagaagcccctgccccagtttcctcgcaccatcggcgtcatcacc
agcccgaccggggcggtgatccgcgacgtcctgcaccggatcgccgaacgctggccctgc
cgggtgatcgtctggcccgtcgtggtccagggcgaggcggcgtgcggccaggtgtcgaac
gccatccgcggcttcgacgcgatgaccgtcgatgggccgatcccccgccccgacctgctg
atcgtggcccgtgggggcggctcggtcgaggacctgtggtgcttcaacgacgaagggctg
gcgcggacggtcgcggcggcgcggatcccgatcatctcggccgtggggcacgagacggac
accaccctgatcgacttcgtgtccgaccggcgcgcgccgacccccaccggggcggccgag
atcgcgacgccggtgctggcggacctgagatatgcggtcgccgacctggaccggcggatg
gtcctcgccggcgggcggctgatcgaggatcggcgcacgcggctgcgcgccgtggcgcgg
ggtctgccggcgcggccggaggatctgctggccctggcgcagcagcgactggacaacgcc
gccagccgcctggggtcgggcctgcaacgcaatgtcgccctgcacgaacggcatctggcc
gtgacgggcggcaagctgagccccgccctgttgcgggcgcggatcgagcgaggacaggac
cggttgcgcggcgcgggcgaccggctgggcgccgccttgcaagccggcgtggcgcgcggc
gagcggcggctgcttcaggtttcggcgcgactgtcgccagcccccctgcatcgtcggctg
gaccagcgcgaggcgcggttgcaggcgcttggggcgcggctggacggcgtcatgccgcgt
cggctggaacgggacgcggatcggctggcgggcctgacgcgcgccctggccacgctggac
cccggccggcccaagcccggcttcgcccgcgtggaaaatccggacggcgactggatcact
tccgcggcgacgctggaggcgggccaggcggtgcgtcttgtgttcggtgacggcgcaagg
ggcgcgatcatcgacggcggcgacggccgtacagcgtccgccccggcgcggccggcgcct
cggcccaagcctgccgcgccggggcaaggcgacctgttctga
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