Brevundimonas mediterranea: GYM46_14765
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Entry
GYM46_14765 CDS
T06564
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bmed
Brevundimonas mediterranea
Pathway
bmed03030
DNA replication
bmed03430
Mismatch repair
bmed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GYM46_14765 (dnaE)
03430 Mismatch repair
GYM46_14765 (dnaE)
03440 Homologous recombination
GYM46_14765 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmed03032
]
GYM46_14765 (dnaE)
03400 DNA repair and recombination proteins [BR:
bmed03400
]
GYM46_14765 (dnaE)
Enzymes [BR:
bmed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GYM46_14765 (dnaE)
DNA replication proteins [BR:
bmed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GYM46_14765 (dnaE)
DNA repair and recombination proteins [BR:
bmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GYM46_14765 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QIH74100
UniProt:
A0AB37EB68
LinkDB
All DBs
Position
3009136..3012597
Genome browser
AA seq
1153 aa
AA seq
DB search
MSEPVNSQGFVHLRVRSAYSLLEGAIKAGKLGKLAADAGMPAVAIADRTNLFGALEFSQY
TRDAGVQPIIACALPVFGIGGHQAVRWAKTPTVVLLVQNEAGWRNLCALSSSAYLDAGEM
AEPGVAWDQVVARSEGLILLSGGPDGPVDPLFAQGKTNEGAAALATMKSAFGDRFYVELQ
RHGLEDEKRAEPGLVEWAYAHETPLVATNDVYYAKAAQAKSHDALLCIADGAFTGQEDRR
RITGEHWFKSAEAMRDLFADLPEACDNTIDIARRCAFLVNTHAPILPRFDTGAGRSEADE
LAHQAREGLKVRLGQITPAVPEAEYWSRLEWEVGIIQQMGFPGYFLIVSDFIKWAKEHGI
PVGPGRGSGAGSLVAWSLTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERREEVID
YVQDRYGKDRVAQIITFGTLQARAVLRDVGRVLQMPLGQVDRLCKMVPNNPANPVTLAQA
IDLEPRLKEARDAEPAVRTLLETALELEGLYRNASTHAAGIVIGDRPLVELVPLYQDPRS
TIPASQFNMKWVEPAGLVKFDFLGLKTLTVLDRARGYLERRGAAQDWNGLPLDDARTYEL
MASGQTVGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPMEMIDTYIDRKFGRAEV
DYLHPSLKEVLTETYGVIIYQEQVMKIAQILAGYSLGEADLLRRAMGKKKKEEMDFQRAR
FVKGALEKTVPETQSGSIFDLVAKFAGYGFNKSHAAAYALISFQTGWLKANHPVEFFAAS
MSLDLSNTDKLAVFYQDAKRFDVPVLPPDLNRSSADFDVAWDDSRGVVLYALGAIRNVGL
EAMKHVIEVRETGGRFADIFDFLERVDPRSVNKRALEGLAKAGAFDSIHPNRRQLVEQAD
VLMAYCQSVAAERASSQVSLFGGDQAHVGRPRLKSVEPWVGPERLDHELSAVGFYLSGHP
LDEMTSALKRKRVTFVAEAIPLAESGHEAFQMAGVVRRKQERASARTGEKFAFVTFSDPT
GEFECLFPPEQLRKCREVLEPGASVMVRVRAKASEGEVRFFGDDASQMDNLLDDANIGLR
IHVSARTADAEALKARLERARSGAIGKGGEISLVASLEGRQEVEVKLPGRYRLDGALRGA
LKSAPGVLMLEEA
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaaccggtcaacagtcagggtttcgtccatctgcgggtccgctcggcctattcg
ctgctggaaggcgcgatcaaggcgggcaagctgggcaagctggcggcggacgcgggcatg
ccggccgtggccatcgccgaccggaccaatctgttcggcgcgctggagttcagccagtac
acccgtgacgccggggtccagcccatcatcgcctgcgccctgccggtgttcggcatcggc
ggacaccaggccgtgcgctgggccaagaccccgaccgtggtcctgctggtccagaacgag
gccgggtggcgcaacctgtgcgccctgtcgtcctcggcctatctggacgcgggcgaaatg
gccgaaccgggcgtggcctgggatcaggtcgtggcgcggtccgaggggctgatcctgctg
tcgggcggccccgacggtccggtcgatcccctgttcgcccagggcaagacgaacgagggg
gcggccgccctggcgacgatgaagtccgccttcggcgaccgcttctatgtcgagctgcag
cgtcacgggctggaggacgaaaagcgggccgagccgggtctggtcgaatgggcctacgcc
cacgagacgcccctggtcgcgaccaatgacgtctattacgccaaggcggcccaggccaag
tcgcacgacgccctgttgtgcatcgccgacggcgccttcaccggccaggaagaccgccgc
cgcatcaccggcgaacactggttcaagtcggccgaggcgatgcgcgacctgttcgccgac
ctgcccgaggcctgcgacaacaccatcgacatcgcccggcgctgcgcctttctggtcaac
acccatgcgcccattctgccgcggttcgacaccggggcagggcggtccgaggccgacgaa
ctggcgcaccaggcgcgcgaggggctgaaggtgcgccttggccagatcacccccgctgtg
cccgaggcggaatactggagccggctggaatgggaggtcggcatcatccagcagatgggc
ttccccggctatttcctgatcgtgtccgacttcatcaaatgggccaaggagcacggcatc
ccggtggggccggggcggggctcgggggccggctctctggtcgcctggtccctgaccatc
accgacctcgacccgctgcggttcggcctgctgttcgagcggttcctgaaccccgaacgg
gtctccatgcccgacttcgacatcgacttctgccaggagcggcgcgaagaggtgattgac
tatgtccaggaccgctacggcaaggaccgtgtggcccagattatcaccttcggcaccctg
caggcgcgggccgtgctgcgcgacgtcggccgggtgctgcagatgccgctgggccaggtg
gaccggctctgcaagatggtgccgaacaacccggccaatcccgtcaccctggcccaggcc
atcgacctggagccgcgcctgaaggaagccagggacgccgaacctgcggtccgcaccctg
ctggagacggcgctggagctggaggggctgtaccgcaacgcctcgacccacgccgccggc
atcgtcatcggcgaccggcctctggtcgaactggtgcccctgtaccaggatccgcgctcg
accattccggcctcccagttcaacatgaaatgggtcgagccggcgggtctggtgaagttc
gacttcctgggcctgaagaccctgaccgtgctggaccgcgcgcgcggctatctggaacgg
cgcggcgcggcgcaggactggaacggcctgccgctggacgacgcccgcacctatgagctg
atggcctcgggccagaccgtcggggtgttccagctggaatcccagggcatgcgcgacacc
ctgcgcaagatgcgctgcggctccatcgaggagatcaccgccctgatctcgctgtatcgg
ccggggccgatggagatgatcgacacctatatcgaccggaagttcggtcgggccgaggtc
gattatctgcaccccagtctgaaggaggtgctgactgagacctacggggtcatcatctac
caggaacaggtgatgaagatcgcccagatcctggcgggctacagcctgggcgaggccgac
ctgctgcgtcgcgccatgggcaagaagaagaaggaggagatggacttccagcgggcgcgc
ttcgtcaagggcgcgctggagaagaccgtccccgagacccagtccggctcgatcttcgac
ctggtggccaagttcgccggttatggcttcaacaagtcgcacgccgccgcctacgccctg
atctcgttccagaccggctggctgaaggccaatcatccggtcgagttcttcgccgcctcg
atgagtctggacctgtcgaacaccgacaagctggcggtcttctatcaggacgccaaacgg
ttcgacgtgccggtgctgccgcccgatctgaaccggtcctcggccgacttcgacgtggcc
tgggacgacagtcgtggggtggtcctctacgccctgggcgccatccgcaacgtcgggctc
gaggcgatgaaacacgtcatcgaggtgcgcgagaccggcggtcgtttcgcagacatcttc
gacttcctggaacgggtcgatccgcgcagcgtcaacaagcgcgcgctggaaggcctggcc
aaggccggcgccttcgacagcatccatccgaaccgccgccaactggtcgaacaggccgat
gtcctgatggcctattgccagagcgttgcggccgaacgcgcctcgtcccaggtctccctg
ttcggcggggatcaggcccatgtcggccggccgcggctgaagagcgtcgaaccctgggtc
gggcccgagcggctggaccatgagctgtcggcggtcggcttctatctgtccggccacccg
ctggacgagatgacctcggccctgaaacgcaagcgcgtcaccttcgtcgccgaggcgatt
cccctggcggaatcgggccacgaggccttccagatggccggggtggtgcgccgcaagcag
gaacgcgccagcgcccgcaccggcgagaaattcgccttcgtcaccttctcggacccgacc
ggcgagttcgaatgcctgttcccgcccgaacaactgcgcaaatgccgcgaggtgctggag
cccggcgcctcggtcatggtgcgggtccgcgccaaggcgtcggaaggggaggtgcggttc
ttcggcgacgacgccagccagatggacaatctgctggatgacgccaacatcggactgcgc
atccatgtctcggcccgcaccgccgacgccgaggccctgaaggcccggctggaacgcgcc
cgctccggcgccatcggcaagggcggcgaaatctccctggtcgcctcgctggaaggccgt
caggaggtcgaggtcaagcttcccggccgctatcggctggacggcgccctgcgcggcgcc
ctgaagtcggcaccgggcgtcctgatgctggaggaggcgtga
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