Brevundimonas mediterranea: GYM46_15360
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Entry
GYM46_15360 CDS
T06564
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bmed
Brevundimonas mediterranea
Pathway
bmed00541
Biosynthesis of various nucleotide sugars
bmed01100
Metabolic pathways
bmed01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GYM46_15360 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bmed01005
]
GYM46_15360 (rfaD)
Enzymes [BR:
bmed01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GYM46_15360 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bmed01005
]
Core region
GYM46_15360 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QIH74704
UniProt:
A0AB37EBI9
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All DBs
Position
3131324..3132313
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AA seq
329 aa
AA seq
DB search
MIVVTGGAGFIGSNIVARLTAETAYDVVVCDRLETADLAKWKNLAKHSIADFWAPEELFE
QLERHAERIEAVVHMGAISSTTEPDADLILRTNFTLSRDLWDWCAIRDARMIYASSAATY
GDGETGFKDDDDAESLSKLRPLNAYGYSKMLFDQYAVRQSDRGQAPPQWAGLKFFNVYGP
NEGHKGGMKSVVAQIWPKVAAGETVSLFRSHNPNYADGGQLRDFVYVDDVVDIIEFLLQS
PEVSGIFNAGSGQARSFDDLAKATFAAAGKAPSIEYVDMPEAIRDRYQYFTQARMDRIRA
AGFEGQSTPLEEGVRRYVQNFLAQPDKYR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgattgttgtgacgggcggggccggcttcatcggctccaatatcgtggcgcggctgacg
gccgagacggcctatgacgtggtggtctgcgaccggctggagaccgccgacctggccaag
tggaagaacctggccaaacattccatcgccgacttctgggcgccggaagaactgttcgaa
cagctggagcgtcatgcggagcggatcgaggcggtggtgcacatgggcgccatttcgtcc
acgaccgagccggatgcggacctgatcctgcgcaccaacttcaccctgtcgcgcgacctg
tgggactggtgcgcgatccgggacgcccggatgatctacgcctcgtcggcggcgacctac
ggcgacggcgagacggggttcaaggacgacgatgatgcggagtcgctatcgaagctgagg
ccgctaaacgcctatggctattcgaaaatgctgttcgaccagtatgcggtgcgccagtcg
gatcgcggccaggcgccgccccagtgggcggggctgaagttcttcaacgtctatgggccg
aacgaggggcacaagggcgggatgaagtcggtcgtggcccagatctggcccaaggtcgcg
gcgggcgagaccgtcagcctgttccggtcgcacaatcccaactatgccgacggcggccag
ttgcgcgacttcgtctatgtggacgatgtggtcgatatcatcgaattccttctgcagtcg
ccggaggtctcggggatcttcaacgccgggtccggccaggcgcggtcgttcgacgatctg
gccaaggccaccttcgccgcggccggcaaggcgccgtcgatcgagtatgtcgacatgccc
gaggcgatccgcgaccggtaccagtatttcacccaggcccggatggaccggatccgcgcc
gccgggttcgagggccagtccacgcctttggaagagggcgtgcgtcgctacgtccagaac
ttcctggcccagccagataagtacagatga
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