Brevundimonas mediterranea: GYM46_16180
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Entry
GYM46_16180 CDS
T06564
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bmed
Brevundimonas mediterranea
Pathway
bmed00260
Glycine, serine and threonine metabolism
bmed00460
Cyanoamino acid metabolism
bmed00630
Glyoxylate and dicarboxylate metabolism
bmed00670
One carbon pool by folate
bmed00680
Methane metabolism
bmed01100
Metabolic pathways
bmed01110
Biosynthesis of secondary metabolites
bmed01120
Microbial metabolism in diverse environments
bmed01200
Carbon metabolism
bmed01230
Biosynthesis of amino acids
bmed01240
Biosynthesis of cofactors
bmed04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GYM46_16180
09102 Energy metabolism
00680 Methane metabolism
GYM46_16180
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GYM46_16180
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GYM46_16180
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GYM46_16180
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GYM46_16180
Enzymes [BR:
bmed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GYM46_16180
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QIH74349
UniProt:
A0AB37EAM6
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All DBs
Position
complement(3294829..3296112)
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AA seq
427 aa
AA seq
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MTAFTHDAYFTKTLADADPDVFKAIQGEMGRQKEQIELIASENIVSQAVLDAQGSVLTNK
YAEGYPGRRYYGGCEFVDVTEDLARERAKKLFGAAFANVQPHSGAQANQAVFFTLLQPGD
TFLGMDLACGGHLTHGSPANQSGKWFRPVTYKVREDTHLIDYDHVAEMAQKEKPKLILAG
ASAYSRHIDFKRFREIADSVGAYLMVDMAHYAGLVAGGAYPDPLPHAHVVTTTTHKTLRG
PRGGMILSNDADLGKKINSAVFPGLQGGPLEHVIAAKAVAFGEALQPEFKLYAHQVVKNA
QALAGVLVERGLAIVSGGTDSHLALVDLRPKGVTGKATEHELEKALMTCNKNGVPFDTAP
FTVTSGVRLGTPAGTTRGFGEDEFKQIGHWIADVVSSMNGGDEADPAVVAGVAAQVRELT
NRFPIYR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccttcacccatgacgcctatttcaccaagaccctggccgacgccgatccggac
gtcttcaaggccattcagggcgagatggggcggcagaaggagcagatcgagctgatcgcg
tcggagaacatcgtctcccaggcggtgctggacgcgcagggctcggttctgacgaacaaa
tacgccgagggctatcctggtcgtcgctattacggcggctgcgaattcgtcgatgtgacc
gaggatctggcgcgcgaacgggccaagaaactgttcggcgcggccttcgccaatgtgcag
ccccactcgggcgcccaggccaaccaggcggtgttcttcaccctgctgcagcccggagac
acattcctgggcatggacctggcctgcggcgggcacctgacgcacgggtcgccggcgaac
cagtcgggcaagtggttccggcccgtgacctacaaggtccgcgaagacacccatctgatc
gactatgaccacgtggccgagatggcgcagaaggagaagccgaagctgatcctggccggc
gccagcgcctatagccgccacatcgacttcaagcggttccgcgagatcgccgacagcgtc
ggcgcctatctgatggtggacatggcccactacgccggcctggtcgccggcggcgcctat
cccgatccgctcccgcacgcccatgtcgtgaccacgacgacgcacaagaccctgcgcgga
ccgcgcggcggcatgatcctgtccaacgacgccgacctgggcaagaagatcaactcggcc
gtcttccccggcctgcagggcgggccgctggaacatgtgatcgcggccaaggccgtggcc
ttcggtgaggcgctgcagcccgagttcaaactgtacgcccatcaggtggtcaagaacgcc
caggccctggccggcgtcctggtcgagcgcggcctggccatcgtctcgggcggcaccgac
agccacctggccctggtcgatctgcggcccaagggcgtgaccggcaaggcgaccgagcac
gagctcgagaaggcgctgatgacctgcaacaagaacggcgtgccgttcgacaccgccccc
ttcaccgtcacctcgggcgttcgcctcggcacgccggcgggcacgacgcgcggcttcggc
gaggacgagttcaagcagatcggccactggatcgccgacgtcgtctcgtcgatgaacggc
ggcgatgaagccgatccggccgtggtcgcgggcgtggctgcccaggtgcgggagctgacc
aaccgcttccccatctaccgatga
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