Brevundimonas mediterranea: GYM46_16300
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Entry
GYM46_16300 CDS
T06564
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bmed
Brevundimonas mediterranea
Pathway
bmed03420
Nucleotide excision repair
bmed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GYM46_16300
03430 Mismatch repair
GYM46_16300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmed03400
]
GYM46_16300
Enzymes [BR:
bmed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYM46_16300
DNA repair and recombination proteins [BR:
bmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GYM46_16300
MMR (mismatch excision repair)
Other MMR factors
GYM46_16300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_11
DUF3553
PcrA_UvrD_tudor
Agd3_CE
Metallophos_C
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QIH74371
UniProt:
A0AB37EAK8
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All DBs
Position
3311903..3314260
Genome browser
AA seq
785 aa
AA seq
DB search
MTDLPAPRISDLARARAPDGAGPRDYLEGLNPEQREAVEATEGPVLVLAGAGTGKTRVLT
TRLAHILATGRARPWELLVVTFTNKAAREMRERITHLIGPSAEGLRWLGTFHSIAAQILR
RHAELVGLKSSFTILDTDDQERVLKQLLEAANIDTKRWTPKSLSGLIDHWKNRGWTPEKL
PPGEDFANGKGQGLYAAYQARLRSLNACDFGDLLLHNITILSKHADLADEYRRRFRYILV
DEYQDTNVAQYLWLRLLTASTGNVCCVGDDDQSIYGWRGAEVDNILRFERDFPGAKIVKL
ERNYRSTSHILGAASGLIAANRDRLGKTLWTEDDSGDKVRVRGVWDGEAEARLIADEIET
ARRPHAGEPGLKYKDMAILVRASFQMRAFEERLVMLAIPYAVIGGPRFFERAEIRDAHAY
MRLIQSEDDDLAFERIVNVPKRGIGDTSVQKILQLARQHDLSALTAVRGLINTDELQART
RTALSNFVRDLDRWRALSETTPHWEVMETVLEESGYTDMQKADRTSGQTRLDNLKELTQS
MQQFETLQAYLEHVSLVMDLERATSDDPNGDGAVQIMTLHGAKGLEFPLVFLPGWEEGVF
PSQRSIDEKGEKGLEEERRLAYVGVTRAKQDARISFAANRLVYGRWTSQLPSRFVDELPI
AHVDPQSDTGYYGASTGMKEAKSRWDDAPSFGSGYSSPGWKRAQSFTAAQTPNKIPARKA
VIEGDGRLIATADPKSGSGWKKGERVFHQKFGYGHVRVIEGNKLLVDFEKAGEKRVIDSF
VEKAG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcttcccgccccccgcatctccgacctggcccgcgcccgagcgcccgacggg
gcgggaccgcgcgactatctcgaagggctgaatccggaacaacgcgaggcggtggaagcg
accgaggggccggtcctggttctggccggcgccggcaccggcaagacgcgggtgctgacc
acgcggctggcgcacatcctggcgaccggccgggccaggccgtgggaactgctggtcgtc
accttcaccaacaaggccgcccgcgagatgcgcgagcggatcacccatctgatcggtccc
tcggccgaagggttgcgctggctgggcaccttccactccatcgccgcccagatcctgcgt
cggcacgccgaactggtcgggctgaagtccagcttcaccatcctggacaccgacgaccag
gaacgggtgctgaaacagctgctggaagccgccaatatcgacaccaagcgctggacgccc
aagtcgctgtccggcctgatcgaccactggaagaaccgcggctggacgcctgagaaattg
ccccccggcgaggatttcgccaacggcaagggccagggcctgtacgccgcctatcaggcc
cgcctgcgcagcctgaacgcctgcgacttcggcgacctgctgctgcacaacatcaccatc
ctgtccaaacatgcggacctggcggacgaatatcgtcgccggtttcgctacattctggtg
gacgaatatcaggacaccaacgtcgcccagtatctgtggctgcggctgctgacggcctcg
accggcaatgtctgctgtgtcggcgacgacgaccagtcgatctacggctggcgcggggcc
gaggtggacaacatcctgcgcttcgagcgcgacttccccggcgccaagatcgtcaagctg
gagcgcaactatcgctcgaccagccatatcctgggcgccgcctcgggcctgatcgccgcc
aaccgcgaccggctgggcaagaccctgtggaccgaggacgacagcggcgacaaggtgcgg
gtgcgcggcgtctgggacggcgaggccgaggcccggctgatcgccgacgagatcgagact
gcgcgtcgtccccatgccggcgaaccggggctgaaatacaaggacatggccatcctggtc
cgcgcctcgttccagatgcgggccttcgaggaacggctggtcatgctggccatcccctat
gccgtcatcggcggcccgcgcttcttcgaacgggccgagatccgcgacgcccacgcctat
atgcggctgatccagtccgaggacgacgatctggccttcgagcggatcgtcaatgtgccc
aagcgcggcatcggcgacaccagcgtacagaagatcctacaactggcccgccaacacgac
ctgtcggccctgacggcggtgcgcggcctgatcaacaccgacgagcttcaggcccgcacc
cgcaccgccctgtccaacttcgtgcgcgacctcgaccgctggcgcgccctgtccgagacc
acgccccattgggaggtcatggaaacggtgctggaggagagcggctacaccgatatgcag
aaggccgaccggaccagcggtcagacccggttggacaacctgaaggaactgacccagtcg
atgcagcagttcgagacgctgcaggcctatctggaacacgtctccctggtcatggatctg
gagcgcgcgaccagcgacgatccgaacggcgacggcgcggtccagatcatgacccttcac
ggcgccaaggggctggagttccccttggtcttcctgccgggctgggaggaaggcgtcttc
cccagccagcgcagcatcgatgaaaaaggcgagaagggcctcgaggaggaacgccgcctg
gcctatgtcggcgtcacccgcgccaaacaggacgcccgcatatccttcgccgccaatcgt
ctggtctatggccgttggacctcgcaactgcccagccgcttcgttgacgaactgccgatc
gcccacgtcgatccccagtccgacaccggctactacggcgcctccaccgggatgaaggag
gccaagagccgctgggacgacgcacccagcttcggcagcggctattcctcgcccggctgg
aaacgcgcccaaagcttcaccgccgcccagacgccgaacaagatccccgcccgcaaggcc
gtgatcgagggcgacggccgcctgatcgccaccgccgatcccaagtccggctccggctgg
aaaaagggcgaacgcgtcttccaccagaagttcggctacggccacgtccgcgtcatcgag
ggcaataagctgctggtcgatttcgaaaaggccggcgagaaacgggtgatcgacagtttc
gtggagaaggcaggctaa
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