KEGG   Brevundimonas mediterranea: GYM46_16315
Entry
GYM46_16315       CDS       T06564                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bmed  Brevundimonas mediterranea
Pathway
bmed00010  Glycolysis / Gluconeogenesis
bmed00020  Citrate cycle (TCA cycle)
bmed00260  Glycine, serine and threonine metabolism
bmed00280  Valine, leucine and isoleucine degradation
bmed00310  Lysine degradation
bmed00380  Tryptophan metabolism
bmed00620  Pyruvate metabolism
bmed00630  Glyoxylate and dicarboxylate metabolism
bmed00640  Propanoate metabolism
bmed00670  One carbon pool by folate
bmed00785  Lipoic acid metabolism
bmed01100  Metabolic pathways
bmed01110  Biosynthesis of secondary metabolites
bmed01120  Microbial metabolism in diverse environments
bmed01200  Carbon metabolism
bmed01210  2-Oxocarboxylic acid metabolism
bmed01240  Biosynthesis of cofactors
Module
bmed_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bmed_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bmed_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
bmed_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bmed_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bmed00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    GYM46_16315 (lpdA)
   00020 Citrate cycle (TCA cycle)
    GYM46_16315 (lpdA)
   00620 Pyruvate metabolism
    GYM46_16315 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    GYM46_16315 (lpdA)
   00640 Propanoate metabolism
    GYM46_16315 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    GYM46_16315 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    GYM46_16315 (lpdA)
   00310 Lysine degradation
    GYM46_16315 (lpdA)
   00380 Tryptophan metabolism
    GYM46_16315 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    GYM46_16315 (lpdA)
   00670 One carbon pool by folate
    GYM46_16315 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bmed04147]
    GYM46_16315 (lpdA)
Enzymes [BR:bmed01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     GYM46_16315 (lpdA)
Exosome [BR:bmed04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   GYM46_16315 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 FAD_oxidored HI0933_like GIDA DAO AlaDh_PNT_C 2-Hacid_dh_C FAD_binding_3 Lys_Orn_oxgnase 3HCDH_N Lycopene_cycl Amino_oxidase
Other DBs
NCBI-ProteinID: QIH74373
UniProt: A0AB37EBH6
LinkDB
Position
complement(3315755..3317161)
AA seq 468 aa
MAAEFDLVVIGSGPGGYVAAIRASQLGQKVAIVERENLGGICLNWGCIPTKALLKSGEKF
ESLSHLKEYGLSASGASFDFDAIIQRSRGVAATMNKGVAFLMKKNKIEVIEGSAKLEKGA
AAPKVVIALKAGGSRTVEAKAVMLAVGARARALPQIGLEADGDKIWAYRDALAPKKLPKS
FVVIGSGAIGIEFASFYRALGAEVTVVEAVERIMPVEDEEVSKAAQKSFEKRGIKFKLGA
KVTKVSKTGAGVKVDIEVGGKAESLEAEVCISAVGITANTDGIGLEALGVELDRGHIKTD
GHCQTNVKGLFAIGDCAGAPWLAHKASHEGIHAAEFIAGYKTPNVNSPIAGCTYAQPQVA
SVGVTEQAARAEKREVKIGRFPFRVNGKAVAAGEIDGFVKVIFDAKTGALIGAHMIGHEV
TEMIQGYVTAITMEATEEDIHGIVYPHPTMSEAMHEAALDAYGRVLHI
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggctgctgaattcgatctcgtcgtcatcggctcgggccccggcggttacgtcgcggcc
atccgcgccagccaactgggccagaaggtcgccatcgtcgagcgcgagaacctgggcggc
atctgcctgaactggggctgtatcccgaccaaggccctgctgaagtcgggcgagaagttc
gagagcctgagccatctgaaggaatacggcctgtcggcgtccggcgcgtcgtttgacttc
gacgccatcatccagcgctcgcgcggcgtcgcggcgacgatgaacaagggcgtcgccttc
ctgatgaagaagaacaagatcgaggtgatcgagggctcggccaagctggagaagggcgct
gcggcgcccaaggtcgtcatcgccctgaaggccggcggttcgcgcacggtcgaggccaag
gcggtcatgctggccgtcggcgcgcgggcgcgcgccctgccgcagatcggcctggaggcc
gacggcgacaagatctgggcctatcgcgacgccctggcgccgaagaaactgcccaagtcc
ttcgtcgtcatcggctcgggcgccatcggcatcgagttcgccagcttctatcgcgccctg
ggcgccgaggtgacggtcgtcgaggcggtcgagcgcatcatgccggtcgaggacgaggag
gtctccaaggccgcccagaagtcgttcgagaagcgcggcatcaagttcaagctcggcgcc
aaggtgaccaaggtctccaagaccggcgccggcgtgaaggtggacatcgaggtcggcggc
aaggccgagtcgctggaggccgaggtctgcatctcggcggtcggcatcaccgccaacacc
gacggcatcggcctggaggcgctgggcgtcgaactggaccgcggccacatcaagaccgac
ggccactgccagaccaacgtcaagggcctgttcgccatcggcgactgcgccggcgcgccc
tggctggcgcacaaggcctcgcacgaaggcatccacgccgccgaattcatcgccggctac
aagaccccgaacgtcaattcgcccatcgccggctgcacctacgcccagccgcaggtcgcc
tcggtcggcgttaccgaacaggccgcccgcgccgagaagcgtgaggtcaagatcggccgc
ttcccgttccgcgtgaacggcaaggccgtggccgccggcgagatcgacggcttcgtcaag
gtgatctttgacgccaagaccggcgccctgatcggcgcccatatgatcggccacgaagtc
acggagatgatccagggctatgtcaccgccatcaccatggaggcgacggaagaggacatt
cacggcatcgtctatccgcacccgaccatgtcggaagccatgcacgaggcggcgctggac
gcctacgggcgtgtgctgcatatctga

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