Brevundimonas mediterranea: GYM46_16605
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Entry
GYM46_16605 CDS
T06564
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
bmed
Brevundimonas mediterranea
Pathway
bmed00550
Peptidoglycan biosynthesis
bmed01100
Metabolic pathways
bmed01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GYM46_16605 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GYM46_16605 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bmed01011
]
GYM46_16605 (mrdA)
Enzymes [BR:
bmed01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GYM46_16605 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
bmed01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GYM46_16605 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QIH74422
UniProt:
A0AB37EB15
LinkDB
All DBs
Position
complement(3377340..3379400)
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AA seq
686 aa
AA seq
DB search
MSGEPSIFFSDVNERQGSFLRRTFVFGGLTALGVTALVGRLAQLQVVQAQEYATLSSQNQ
FNFRLVPPPRGLIKDRNGVVIAGNRPSFRVLVIRDETKDLDQTLDLLGRLLPDTLERRRA
IIREVNASPKFNPVPVKSDLTWEEFAKVNQYANELPGVMADMNEARYYPFGGAFAHVIGY
VAKVSDRDVKAIRDKGETVPPLLFNPGFRIGRQGVEKALDEALRGEPGGNRVEVDARGRV
VAEDIGGSRTAVPGKEVVLTLDADVQNRALEVFGEESGGCVVMDVRNGDILCMVSAPSFD
PNLFVGGIPSNVYSALRDYERKPLLDKAIGGVFHPGSTFKLTTSLALLEAGVDPDERVVC
TGGYRFGSRTFRCWKPGGHGPMNMHDAIKTSCDVYFYHMCNRAGVDKIQEVGKKIGFMQT
YDIGVGNQKAGSIPSRAWKANYNKNNPNPDSRTWYPGETLSVAIGQGDVNVTALQLAVTT
ARFANARKAIMPRLIKSVGGVDQPSGAAVPDLPFPPEHLEIVRQGMVAVANDVGGGAYRQ
SQLGLGDIKMAGKTGTAQVRNYGTGSRKSADVTWALKDHNLFVAFAPVDEPRYAIAVIIE
HGGLAGSTAAAPRAREIMRTVLLKDPDMVARMTRPPPPEPTASAETAELEGAAPPEPDVV
GAETARRTRQMPTVTTGPRPYLSEPR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgaaccctccatcttcttttccgacgtcaacgagcgccagggctccttcctg
cgccgcaccttcgtgttcggcgggctgacggccctgggggtcacggccctggtggggcgg
ctggcccagcttcaggtcgtccaggcccaggaatatgcgaccctgtcgtcgcagaaccag
ttcaacttccgcctggtcccgccgccgcgcggcctgatcaaggatcgcaacggcgtggtc
atcgccggcaaccggcccagtttccgggtgctggtgatccgtgacgagaccaaggatctg
gatcagacgctggatcttctgggccgtctgctgcccgacaccctggaacgtcgacgcgcg
atcatccgcgaggtcaacgcctcgcccaagttcaaccccgtgccggtcaagagcgacctg
acctgggaggagttcgccaaggtcaaccagtacgccaacgaactgcccggcgtcatggcc
gacatgaacgaggcccggtactatccgttcggcggcgccttcgcccatgtgatcggttat
gtcgccaaggtgtctgaccgcgacgtcaaggcgatccgcgataagggcgagacggtgccg
ccgctgctgttcaaccccggtttccggatcggacgccaaggcgtcgaaaaagcgctggac
gaagccctgcgcggagagccgggcggcaaccgggttgaagtggacgctcggggccgggtg
gtggccgaggatatcggcggttcacgcaccgccgtgccgggcaaggaggttgttcttact
ctggacgccgatgtccagaaccgggcgctggaggtgttcggcgaagagtccggcggttgc
gtggtgatggacgtccgcaacggcgacatcctctgcatggtgtccgcgccctcgttcgac
cccaacctgtttgttggcggtattccctccaacgtctacagcgctctccgcgattatgag
cgcaagccgctgctcgacaaggccatcggcggcgtctttcaccccgggtcgacgttcaaa
ctgacaacctcgctggccttgctggaggctggggtcgatcctgacgagcgggtggtctgc
accggcggctatcgcttcgggtcacggactttccgctgctggaaacccggcggccacggc
cccatgaacatgcatgatgcgattaagacgtcgtgcgatgtctatttttatcacatgtgc
aatcgggccggcgtcgataagattcaggaggtcggcaagaagatcggcttcatgcagacc
tatgacatcggggtcggcaaccagaaggccggatcgattcccagtcgggcctggaaggcg
aactacaacaagaacaatccaaaccctgattctcggacctggtatccaggcgagaccttg
tcggttgcgatcgggcagggcgacgtgaacgtcacagctctgcaactggcagtgacgacc
gcgcgcttcgccaatgcacgaaaggcgatcatgccgcgtctgatcaagtcggtcggcggg
gtggatcaacccagcggcgctgcggtgcccgatctgcccttcccacccgaacacctcgaa
attgttcgtcagggcatggtggcggtggccaatgacgtcgggggcggcgcctatcgccag
agccagctagggctcggcgacatcaagatggccggcaagacaggcacggcgcaggtgcgc
aactacggaacaggctctcgcaagagcgccgacgtcacctgggcgctgaaggaccacaac
ctatttgtggcgttcgcccctgtggacgagccgcgctacgctatcgccgtcatcattgag
catggcggcttggccggatcgaccgctgcggctccacgtgcgcgcgaaatcatgcgcaca
gtgctgcttaaggacccggacatggtggcgcgtatgacgcgaccaccaccaccggagcct
acagcctcggccgagacagccgaactagaaggcgctgcgcctcccgagccggatgtcgtg
ggggctgagacggcgcgtcgcacccgtcagatgccgaccgtcaccacgggcccgcgtccc
tatctgtccgagccgcgctga
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