Brucella melitensis bv. 3 Ether: DK62_654
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Entry
DK62_654 CDS
T03393
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bmee
Brucella melitensis bv. 3 Ether
Brite
KEGG Orthology (KO) [BR:
bmee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmee03016
]
DK62_654 (rnd)
Enzymes [BR:
bmee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DK62_654 (rnd)
Transfer RNA biogenesis [BR:
bmee03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DK62_654 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
CecR_C
EP400_N
Motif
Other DBs
NCBI-ProteinID:
AIJ86306
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All DBs
Position
1:661462..662619
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AA seq
385 aa
AA seq
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MQLITTTEALEEAVSALAKSDFVTVDTEFIRETTFWPELCLIQMASPDHTALVDALAPGL
DLAPFFRLMADEEIVKVFHAARQDIEIVFHLGNLIPSPVFDTQVAAMVCGFGDAISYDQL
VQKVTGKHLDKSSRFTDWRRRPLSDKQLDYALADVTYLRDIYLYLKEELQKEGRSEWVNE
EIAVLTARQTYDLHPDDAWRRVKARVRKPLELAIVQAVAAWREREARERNVPRGRIIKDD
TIAEIAQQQPRDAEALGRLRSIPKGWERSAQAAGLVTAIQSALAIAKEDLPKSPKPSHSP
EGSAAAADILKVLLKLVTEEHGVAAKIVANSDDIEKIAAEGDKANVPALHGWRREVFGQK
ALDLIDGKIGIKFENRRIRAVELRE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcatcacgaccaccgaggcccttgaagaggccgtatccgcccttgccaaatcc
gatttcgtcacggttgacacggagttcatccgtgaaacgaccttctggccggaattgtgc
ctgatccagatggcctcacctgaccatacggcgctggtggatgcgctggcgccggggttg
gaccttgcgcccttcttccgcctgatggccgatgaggaaatagtcaaggtcttccatgcc
gcccggcaggatatcgagattgtctttcatctgggcaatctgatcccctcgccagttttc
gacacgcaggtggcggcaatggtctgcggctttggcgatgcgatttcctatgaccagctc
gtgcagaaggttacgggcaagcacctcgacaagtcctcgcggtttaccgactggcgccgc
cgcccgctttccgacaagcaactcgattatgcgctggcggacgtgacctatctgcgcgac
atctacctctatctgaaggaagagcttcaaaaagaagggcgcagcgagtgggtgaacgag
gaaatagcggtgctgaccgcgcgccaaacttacgatcttcatcctgatgacgcatggcgg
cgcgtgaaggcgcgtgtgcgtaaaccacttgagcttgccatcgtgcaggccgttgccgcc
tggcgcgagcgcgaggcgcgcgaacgcaacgtgccgcgcgggcgcatcatcaaggacgac
acgattgccgaaatcgcacagcagcagccgcgtgacgccgaggcgctcggtcgccttcgt
tccatccccaagggttgggagcgttccgcacaggcggcaggccttgtcacggcgatccag
tcggcgcttgcaatcgcgaaggaagaccttcccaaatcgccaaagccatcccactcaccg
gaaggcagcgccgccgctgcggatatcctgaaagtcctgctcaagctggtgacggaagaa
catggcgtggcagcaaagatcgtcgccaattccgacgatattgaaaagatcgccgcggag
ggcgacaaggcgaacgtccctgccctgcacggctggcgacgcgaggttttcggccagaag
gcactcgatctcatcgacggcaagatcggcatcaagtttgagaaccgacggatcagagcg
gtggagttaagggagtaa
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