Bacillus megaterium NBRC 15308 = ATCC 14581: BG04_3634
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Entry
BG04_3634 CDS
T03825
Symbol
rnjA
Name
(GenBank) ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bmeg
Bacillus megaterium NBRC 15308 = ATCC 14581
Pathway
bmeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BG04_3634 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmeg03019
]
BG04_3634 (rnjA)
Messenger RNA biogenesis [BR:
bmeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BG04_3634 (rnjA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
DUF4453
Motif
Other DBs
NCBI-ProteinID:
AJI22855
UniProt:
A0A0B6AD46
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All DBs
Position
complement(3490125..3491792)
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AA seq
555 aa
AA seq
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MKFVKNNQTAVFALGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYL
VKNADKIRGLFVTHGHEDHIGGIPYLLRELNIPIYAGKLALGLLRNKLDEHGLLRTAQLH
EITEDDVIKFRKTSVTFFRTTHSIPDSYGIVVKTPNGQIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEIPNFTMSERRVGDSIHDIFRKVDGRIIFATFASNIHRLQQ
VVEAAVLHNRKVAVFGRSMEAAIEIGQQLGYISCPKDTFIEPSQINRIPANRVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVSKTIDMLFRAGAEVIHGAL
NDIHTSGHGGQEEQKLMLRLMKPKYFMPIHGEYRMQKMHIKLATDCGVPEENCFIMDNGE
VLALSDSEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKDFKI
AAGPDIISRGFVYMRESGDLINDAQSLITKHLNKVMERRTSQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtaaaaaataatcaaacggcagttttcgccctgggtggactaggcgaaatc
ggtaaaaacacgtatgccgtacagtttcaagatgaaattattcttattgatgcaggaatt
aaattccctgaagatgagcttttaggaattgactacgttattcctgactacagttattta
gtaaaaaatgcagataaaatccgtggccttttcgttacacatggtcatgaagatcacatc
ggcggaattccttacttattaagagaattaaacattcctatttatgcagggaaattagcc
cttggacttcttcgcaacaaattagacgagcatgggttgcttcgtacagctcagcttcat
gagattactgaagatgacgtaattaaattccgtaaaacatcggtaactttcttccgcaca
actcacagtattcctgattcttacggaattgtggtaaaaacaccaaacggacaaatcgta
catacaggagatttcaagtttgattttacaccagtgggcgaaccggctaacttaacaaaa
atggctgaaatcggtaaagaaggcgttctatgcttgctttcagacagtacaaacagtgaa
attcctaactttacgatgtctgagcgccgcgtaggtgacagcattcatgacattttccgt
aaagtagacggccgtattatttttgcaacgtttgcttcaaatattcaccgcttacagcaa
gtagtggaagcagccgtattgcataaccgtaaagttgctgtattcggacgcagtatggaa
gcagctattgagattggccaacagctgggatatatttcatgtccaaaagatacgttcatt
gagccttctcaaattaaccgaattccagctaaccgcgtgactattttatgtacaggcagc
caaggtgaaccgatggcagcgctatctagaattgcaaacggtactcaccgccaaattcaa
attatccctggagatacggttgtattctcatcttcacctattccaggaaatacagtaagt
gttagcaaaacaattgatatgctattccgtgcaggagcagaggttattcacggtgctcta
aacgatatccatacttctggacacggcggacaggaagagcaaaaattaatgcttcgtttg
atgaaaccaaaatactttatgccaattcacggtgagtatcgcatgcagaagatgcacatc
aaacttgcaacagactgtggagttcctgaagaaaactgcttcattatggataatggagag
gtgctagctttaagcgacagcgaagcttcagtagccggcaaaatcccttcaggctctgta
tatattgacggaagcggaattggtgacattggaaatatcgtacttcgtgatcgccgcatt
ttatctgaagaaggtcttgttattgtggttgtaagcatcaatatgaaagacttcaagatc
gctgctggtccagacattatctctcgtggttttgtttatatgcgcgaatctggcgactta
attaatgatgcacagtccctcattacaaaacacttgaacaaagtgatggaacgtcgtacg
tcacaatggtctgagattaaaaatgaaatcacagacacattggctccattcctttacgaa
aaaacaaagcgccgtccaatgattttaccaatcattatggaggtttaa
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