Botrimarina mediterranea: Spa11_02150
Help
Entry
Spa11_02150 CDS
T09862
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bmei
Botrimarina mediterranea
Pathway
bmei03030
DNA replication
bmei03430
Mismatch repair
bmei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spa11_02150 (dnaE)
03430 Mismatch repair
Spa11_02150 (dnaE)
03440 Homologous recombination
Spa11_02150 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmei03032
]
Spa11_02150 (dnaE)
03400 DNA repair and recombination proteins [BR:
bmei03400
]
Spa11_02150 (dnaE)
Enzymes [BR:
bmei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spa11_02150 (dnaE)
DNA replication proteins [BR:
bmei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Spa11_02150 (dnaE)
DNA repair and recombination proteins [BR:
bmei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Spa11_02150 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
PHP_C
Motif
Other DBs
NCBI-ProteinID:
QDV72045
UniProt:
A0A518K2R6
LinkDB
All DBs
Position
complement(264632..268363)
Genome browser
AA seq
1243 aa
AA seq
DB search
MPYHGAAGTGDGPAHKILLASLLPTADRPLPTLPVMEVITRPFVHLHCHSHYSLLDGASP
VKKLVARAKELNMNALALTDHGNLYGALEFYKACKAEGINPIVGYEAYIAPGSRFEKEGA
TRSKEAAYHLTLLAKDRAGFRNLVKMASRAYLEGFYHKPRIDKELLADHNEGIICLSGCV
SGELSRSLLSGASADEAMARGAEISGWFSKVFGDRYFLEIQDNGVEIQRAAKELTVELAN
RQGLPLVATSDAHYVNQEDAEAQDVLLCINTGRFRTDTNRMKMEGDQFYLRAPEDMYAAM
PDVADAVARSQEIADSVDLDLELGKRYFPTFTAPNNDKPDIKASEAYLRELVLSGLKERY
AKTPERWQNGDASTGELSDEVLARVDRELGVINKLGFPDYFLIVWDFVRFAVENNIPSTA
RGSGVGSIVCYALRMSHVCPLQYDLLFERFLDESRLEAPDIDIDFCKERRGEVIQYVKDK
YGEANVAQIGTFGTLAARAAIKDVGRTMSMPIFRVDQITAMVPEQLGITLEKALETSEEL
KKAYEGDPEIRELLDLAKKVEGLARNVGTHAAAVVISEKPVDEYVPLQRVKGKTEVITQW
AMGDVEAAGLLKMDFLGLRNLTILAKSVELIEQSTGEKVDPYEFPIDDKESYALLCRGET
KGIFQLESGGIRDLLQRMKPDNFLDIIATAALYRPGPLEGGMVDQYIEVKHGRRPAEYPH
PVMEEVLAETHGVMVYQEQVMRILNRLGKIPLSEAYSCIKAISKKKLPMIAKFYEEFLKG
AQEQGLDKKKAEDLFEMIKKFAGYGFNKSHSTAYALIAYMTAYLKAHYPVQFMAALLSGD
IPGRNFKSKDALVEHIEDCERMGIAVDAPTVNTSSVDFAVVPHKEEGYKHDFKIIFGLSA
IKACGGGAAEAIVAARKKGGPFKDLYDFCERVDPSSCNRSTIETLIKAGAMDVFGANRAS
LMAGIDKAMQSGASVLADRKSGQKGLFGEEIEAAAAPAPLPDVPELDEKERLTMEKEVLG
YYLSSHPLAEYEQTLRTFCSHSSTQCGGLEHRTEVVMGGMLAAIKMSHTKNPKPGAPSKY
AMWDLEDMDGIMRCIMWPEQFAQFGHLVTGDAIVGIRGAVDRRPGAEEVNLIVNELMPIE
ELSERYTSGVVISLREADGVERLESLREILRGYPGAKSLKLALALEDGGRVQLDCPKGVD
LTQELRTRVDDLLGPGAFRLTGGAPPPKAPTPKKWGKREPARA
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatcatggggcggccgggaccggggacggcccggctcacaaaatcttgctcgct
tcgctgctgcccactgccgaccgcccactgcccactctgcctgtcatggaagtcatcacc
cgcccgttcgttcacctccattgccacagccactactcgctgctggacggggcgagcccg
gtgaagaagctcgtcgctcgcgcgaaagagctgaacatgaacgcgctggcgctcaccgac
cacggcaacctctacggcgcgctggagttctacaaggcgtgcaaggcggaggggatcaat
ccgatcgtcggctacgaggcctacatcgcgccggggagccggttcgagaaagagggcgcc
acgcgcagcaaggaggccgcctaccacctcacgctgttggcgaaggaccgcgccggcttc
cgcaatctcgtcaagatggcgagtcgggcgtacctcgaaggcttctatcacaagccgcgg
atcgacaaggaactgctcgccgaccacaacgaggggatcatctgcctgtcgggctgcgtg
tcgggcgagctctcacgcagcctgctctccggcgcgtcggccgacgaagcgatggcccgc
ggcgccgagatctccggctggttcagtaaagtgttcggcgaccgttacttcctcgaaatc
caggacaacggcgtcgagatccaacgcgcggcgaaggagctgacggtcgagctcgccaac
cggcagggcctgccgctcgtggccacgagcgacgcgcattacgtcaaccaggaggacgcc
gaggcgcaggacgttctgctctgcatcaacacggggcgtttccgcaccgacaccaaccgc
atgaagatggagggagatcagttctacctccgcgcgcccgaggacatgtacgcggcgatg
cccgacgtggccgacgccgtcgcccgcagccaagagatcgccgactcggtcgatctcgac
ctcgaactcggcaagcgctacttcccgacgttcaccgcgccgaacaacgacaagcccgac
atcaaggcgtccgaggcgtacctgcgcgaactggtgctgagcgggctcaaggaacgttac
gccaagacgcccgaacgttggcagaatggcgacgcctctaccggggagttgtccgacgaa
gtgctcgcccgcgtcgatcgcgagctgggcgtcatcaacaagctcggcttccccgattac
ttcctgatcgtctgggacttcgtccgcttcgcggtcgagaacaacatcccctccacggcg
cgtggatcgggcgtgggctcgatcgtttgctacgcgttgcggatgagccacgtctgcccg
ctgcagtacgacctgctgttcgaacggttcctcgacgagagccggctggaagcgcccgat
atcgatatcgacttctgcaaagagcgtcgcggcgaggtcatccagtacgttaaagacaag
tacggcgaggcgaacgtcgcccagatcggcacgttcggaaccctggcggcgcgtgccgcc
atcaaggatgtcggccgcacgatgtcgatgccgatcttccgcgtcgaccagatcacggcg
atggtccccgagcaactgggcatcacgctcgagaaggctttggagaccagcgaagagctg
aagaaggcgtacgagggcgatcccgagatccgcgagctgctcgacctcgccaagaaggtc
gagggcttggctcgcaacgtcggcacgcacgccgcggcggtcgtgatcagcgagaaaccg
gtcgacgagtacgtgccgctgcaacgcgtcaaaggcaagacggaagtcatcacccagtgg
gcgatgggcgacgtcgaagcggccggcctgctgaagatggacttcctcggcctccgcaac
ctgacgatcctcgccaagagcgtcgagctgatcgagcaatcgaccggcgagaaggtcgat
ccctacgagttcccgatcgacgacaaggagtcgtacgcgctgctctgccgcggcgagacg
aagggcatcttccagctcgagtcgggcggcatccgcgacctcttgcagcggatgaagccc
gacaacttcctcgacatcatcgccaccgccgcgctctatcggccggggccgctcgagggc
ggcatggtcgatcagtacatcgaggtcaagcacggccgccgccccgccgagtacccccac
cccgtgatggaagaggtgctcgccgagacgcacggcgtcatggtctatcaagagcaggtg
atgcggatcctcaaccgcctcggcaagatcccgctctccgaggcgtacagctgcatcaag
gcgatcagcaagaagaagctgccgatgatcgccaagttctacgaggagttcctcaagggc
gcgcaagagcagggcctcgacaagaagaaggccgaggacctcttcgagatgatcaagaag
ttcgccggttatggcttcaacaagagccactcgacggcgtacgccctgatcgcctacatg
acggcctaccttaaggcgcactaccccgtgcagttcatggcggcgctcctctcgggcgac
atccctggccgcaacttcaagagcaaggacgcgctcgtcgagcacatcgaggactgcgag
cgaatgggcatcgccgtcgacgcgccgacagtgaatacgagcagcgtcgacttcgccgtc
gtcccccacaaggaggagggctacaagcacgacttcaaaatcatcttcggcctctcggcg
atcaaggcgtgcggcggcggcgcggccgaagcgatcgtcgcggcccgcaagaagggcggc
cccttcaaggacctctacgacttctgcgagcgcgtcgatccttcgtcgtgcaaccgctcg
acaatcgaaacgcttatcaaggccggcgcgatggacgtcttcggcgcgaaccgcgcgtcg
ctgatggcgggcatcgacaaggcgatgcagtcgggcgcgtcggtgctggccgaccgcaag
agcggccagaaaggcctgttcggcgaagagatcgaagccgccgccgcccccgcgccgctg
ccagacgtgcccgagctggacgagaaagagcggctcacgatggaaaaggaggtcctcggc
tactacctctccagccacccgctggccgagtacgagcagacgctacgcaccttctgcagc
cactccagcacgcagtgcggaggcctcgagcaccgcaccgaggtcgtgatgggcggcatg
ctcgccgcgatcaagatgtcgcacaccaagaaccccaagcccggcgcgccgagcaagtac
gccatgtgggacctggaggacatggacggcatcatgcgctgcatcatgtggcccgagcag
ttcgcccagttcgggcacttggtgacgggcgacgcgatcgtcggcatccgcggcgccgtc
gaccgccgccccggcgctgaggaggtgaacctgatcgtcaacgagctgatgccgatcgaa
gaactctcggagcggtacaccagcggcgtggtgatcagccttcgcgaagcggacggcgtc
gaacgcctcgaatcgctacgagaaatcctccgcggttaccccggcgccaagtcgctcaag
ctcgccctagcgctcgaagacggcggccgcgttcaactcgactgcccgaagggcgtggac
ctaacgcaagagctacggacgagagtcgacgacctgctaggccccggcgccttccgcctc
accggcggcgccccgccgccgaaggcgcctacgccgaagaaatggggcaagcgcgaaccc
gcgcgagcctag
DBGET
integrated database retrieval system
