Botrimarina mediterranea: Spa11_03080
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Entry
Spa11_03080 CDS
T09862
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bmei
Botrimarina mediterranea
Pathway
bmei03030
DNA replication
bmei03430
Mismatch repair
bmei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spa11_03080 (dnaX_1)
03430 Mismatch repair
Spa11_03080 (dnaX_1)
03440 Homologous recombination
Spa11_03080 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmei03032
]
Spa11_03080 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
bmei03400
]
Spa11_03080 (dnaX_1)
Enzymes [BR:
bmei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spa11_03080 (dnaX_1)
DNA replication proteins [BR:
bmei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Spa11_03080 (dnaX_1)
DNA repair and recombination proteins [BR:
bmei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Spa11_03080 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_5
AAA_30
TIP49
AAA_14
AAA_18
AAA_16
AAA_2
AAA_19
Glyco_tranf_2_5
RCF1-5-like_lid
DUF815
Mg_chelatase
TsaE
PIF1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QDV72136
UniProt:
A0A518K2V1
LinkDB
All DBs
Position
complement(377011..378591)
Genome browser
AA seq
526 aa
AA seq
DB search
MSDLQTTAAEVSTAGADYMVVARRYRPQRFTELIGQQHVAGALQQAIRTGRIGHAYLFTG
ARGVGKTSAARILAKALNCESGPTPEPCCQCDACERIATGDDVDVLEIDGASNRGIDEIR
QLRQNAGVRPSRSRMKVYIIDEVHMLTKEAFNALLKTLEEPPEHVKFIFATTEPQKIPIT
ILSRCQRFDFAGVDTVSISERLRQIADAEGVGIDEEALQILAVRAAGSMRDSQSLLEQLL
AVADHHISADDVNSLLGIAPAARVAELAERLADRDAATGLALLDSAVRTGADPGQVLDQL
MGYYRDVMAVTVGCPPEQMLTALPGQYDAAKALGERLGVHTLLAAMQVLDQTAARMRVSV
HERTLADMAIVRLATLEDLDSLAQAVADVRANPGAAVKKNVEPSVGPPGLPPAARPQSTP
PPSNGAAKAPSLPPLPPTPAPRPVAPPQPAATAEPANEDNDPNSLMAQFAAMRESAAESR
PGAPASRRVSRRQQQTEIAQHPYVAKAMELFGVEPDRLRYMPPREE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatctgcagacgaccgccgccgaggtgtccaccgctggcgccgactacatggtc
gtcgcccgccgctaccggccgcagcgcttcaccgagctgatcggccagcagcacgtcgcc
ggggcgttgcagcaggcgatccgcacgggccgcatcggccacgcctatctgttcaccggc
gcccgcggggtggggaagacctccgccgcgcggattctggcgaaggccctcaactgcgag
tcgggcccgacgcccgagccctgctgccagtgcgacgcctgcgaacggatcgccaccggc
gacgacgtcgacgtgctcgagatcgacggcgccagcaaccgcggcatcgacgagatccgc
cagctgcggcagaacgccggcgtgcggccgagccggtcacggatgaaggtctacatcatc
gatgaagtccacatgctcacgaaggaggcgttcaacgccctcctcaagacgctcgaagag
ccgcccgagcacgtgaagttcatcttcgcgacgaccgagccgcagaagatcccgatcacg
atcctgtcgcgctgccagcggttcgacttcgccggtgtcgacaccgtctcgatcagcgag
cgcctccgccaaatcgccgacgccgaaggggttggcatcgacgaggaggcgttgcagatc
ctcgccgtgcgtgcggccggctcgatgcgggacagccagtcgctgctcgagcagctgctc
gccgttgccgaccaccacatctcggccgacgacgtcaactcgctgctggggatcgccccc
gcggcgcgcgtggcggagcttgcggagcgtttggcggatcgcgacgcggcgacggggctc
gcgctgctcgactcggcggtccgtaccggcgccgacccggggcaggtgctcgaccagctg
atgggctactaccgcgacgtcatggcggtcaccgtcggctgcccgccagagcagatgctg
acggccctgccgggccaatacgacgcggcaaaggccctcggcgagcgattgggcgtccac
acgctgctggcggcgatgcaagtccttgatcagaccgccgctcgcatgagagtgagcgtt
catgagcggacgctcgccgacatggcgatcgtgcggctggcgacgctcgaggacctcgat
agcctcgcgcaggcggtagcggatgtgcgggcgaatccgggcgctgcggtaaaaaaaaac
gttgagccgtccgtagggccaccggggctgccgcccgcggctagaccacaaagcactcca
ccgccttcgaacggggccgcaaaagcgccttcgcttccgccgttgcctcctactcccgcg
ccgcgtcctgtcgcgccgccgcaaccggcggctaccgccgaacccgccaacgaagacaac
gacccgaacagcctgatggcgcagttcgcggcgatgcgcgagtcggcggcggagtcgcgg
cccggcgccccggcgtcgcgccgcgtgagccgccggcagcagcagaccgagatcgcccag
cacccgtacgtcgccaaggcgatggagctgtttggagtggaaccggaccgtctccgctac
atgcctccgcgcgaagaatga
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