Botrimarina mediterranea: Spa11_03290
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Entry
Spa11_03290 CDS
T09862
Symbol
epsF_1
Name
(GenBank) Type II secretion system protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
bmei
Botrimarina mediterranea
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bmei02044
]
Spa11_03290 (epsF_1)
02035 Bacterial motility proteins [BR:
bmei02035
]
Spa11_03290 (epsF_1)
Secretion system [BR:
bmei02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Spa11_03290 (epsF_1)
Bacterial motility proteins [BR:
bmei02035
]
Pilus system
Pilus assembly proteins
Spa11_03290 (epsF_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Motif
Other DBs
NCBI-ProteinID:
QDV72157
UniProt:
A0A518K302
LinkDB
All DBs
Position
complement(411987..413315)
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AA seq
442 aa
AA seq
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MPTFQFEAMDATGAEIKDVIEAPTEEEAQATIRQMGYFVTKINVKKVRKKAETASAKKKN
RGFVFGGVKSRELTTFTRQLSILQDAGLPIVRSLRILAEQAKPGRLKYSLEDTCEEIEGG
STLSEAMSKSPKCFDRLYVNMIKAGEAGGALELILQRLADFKERSESLKRKIKGAMIYPV
VVVTVAVGILTFIMIAIVPAFEQIFDDFGLELPTATLFLVAVSNWTVNYWYLIPGIPVCI
WLFIKLLRKFRHGRIGWDQFTLKVPIFGPLVEQNILARTTRTLGTLIASGVPILEALNIT
RDTAGNAIFERMYQKISDAIREGEAIAAPMKLNSVPGFHPIAALFWFCFVGGPIGLLLYL
LKYKQRIVDDLVVNMVDVGEETGELDTMLYKIADVYDELVAVRTDSLTKLLEPLLVIFLG
GAVGFIVIALFIPLVKLIEGLS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtttcaattcgaagcgatggacgccaccggcgccgagatcaaggacgtgatc
gaagcgcccacggaggaagaagcgcaggcgacgatccgccagatgggctatttcgtcacc
aagatcaacgtcaagaaggtccgtaagaaggccgagacggcaagcgcgaagaagaagaac
cgcggcttcgtgttcggcggcgtgaagtcgcgtgagctgaccacgttcacccgccaactc
tcgatcctccaggacgcgggcctgccgatcgtgcggagcttgcgcatcctcgccgagcag
gccaagcccggacgcctcaagtactcgctcgaagacacctgcgaagagatcgagggcggt
tcgacgctctccgaggcgatgtccaagagccccaagtgcttcgaccggctctacgtcaac
atgatcaaggcgggcgaggcgggcggcgccctggagctcattctccagcgtctggccgac
ttcaaagaacgatccgagtctctcaagcgtaagatcaaaggggcgatgatctacccggtg
gtggtcgtcaccgtcgcggtcggcatcttgacgttcatcatgatcgccattgtcccggcg
ttcgaacagattttcgacgacttcggcctcgaactccccaccgcgacgctgttcctcgtc
gcggtctcgaactggacggtcaactactggtacctgatcccaggcatcccggtctgtatc
tggctgttcatcaaactcctacgaaaattcagacacggccgcatcggctgggaccagttc
acgctcaaggtgccgatcttcggcccgctagtggagcagaacatcctcgcgcggacgacg
cggacgctgggcaccctgatcgcctcgggcgtgccgatcctcgaggcgctcaacatcacc
cgcgatacggcgggcaacgcgatcttcgagcggatgtatcagaagatcagcgacgccatc
cgtgagggcgaagcgatcgccgccccgatgaagctgaactcggtgccgggattccacccc
atcgcggcgctgttctggttctgcttcgtcggtggcccgatcggcctgctcttgtacctc
ctcaagtacaagcagcggatcgtggacgacctcgtggtgaacatggtcgacgtgggcgaa
gagaccggcgagctcgacacgatgctctacaagatcgccgacgtgtacgacgagctcgtc
gccgtgcggaccgactcgctaacgaagctactcgaaccgctcttggtgatcttcctcggc
ggcgccgtcggcttcatcgtcatcgcgctgttcatcccgctggtgaagctgatcgagggc
ctctcctga
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