Botrimarina mediterranea: Spa11_03810
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Entry
Spa11_03810 CDS
T09862
Symbol
ppsC
Name
(GenBank) Phthiocerol synthesis polyketide synthase type I PpsC
Organism
bmei
Botrimarina mediterranea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
Thioesterase
PS-DH
ADH_zinc_N
ADH_zinc_N_2
PKS_DH_N
adh_short
CurL-like_PKS_C
RhiE-like_linker
adh_short_C2
PP-binding
KAsynt_C_assoc
ADH_N
Abhydrolase_1
Abhydrolase_6
DUF7080
Epimerase
Thiolase_N
AlaDh_PNT_C
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QDV72209
UniProt:
A0A518K355
LinkDB
All DBs
Position
complement(479241..486713)
Genome browser
AA seq
2490 aa
AA seq
DB search
MADLDRLAKLSPEQRTRLQERLVSRAASKLRAAARTGAAASNAPPPRLTEPGAPVAIVGM
ACRFGGAPNLDAYWRLIRDGIEGVVEVPADRWRVDDYYNAEGGPGKTITRRGAFVEGIDQ
FEPTFFGVTPREASRMDPQQRMLLEVAWEAMENAGCPADRLAGTATGVYVGVGGTDYKSV
PIHTAEYFQLIDAHVGTGNALSIASNRVSYALDLRGPSMSVDTACSSSSLAIHLAVESLR
RGECSSALAGGVNAIITPETTIAFSQAHMLSPEGRCRSYDAGAGGYVRGEGCAMVLLKRL
DDAQRDGDQVLGVILGSAVNQDGRTPGISAPSVTQQEACLQSALADAGLQPDDVDYIEGH
GTGTPLGDPIELQALAHVFRKKDADQQPLWVTSVKSNIGHTETVSGAAGLIKTVLLMQHE
VVPPQLHLERLNPHAHLEGSRVTPLTERQQWPSQQANGGRRRVAGVSSFGFGGTNTHLVI
GEAPLPVAIEPRPERTAHVLKLAAKTPDRIPEQAARLAAWLRSDVGGDATVADVAFTHTT
GRCDFQHRVAVVADSTQTLLTRLDNIAAGDMADDALVARDKPGVAWLFTGQGAQRVGMGR
GLYETEPVFRRIIDRCDAALADVLPAPLVEVLYGGEDDARIHQTLYTQPALFAVECGLAA
LWKSWGVEPDVLLGHSIGEYAAAVTAGVMRLEDAAKLVGERARLMQSAPGDGGMAVVFAD
EATVAPVLVSREARLAIAAVNGPQNTVLSGDIVELEAALTDLRGQGVDAKRLVVSHAFHS
PLMDSVLDEFERFAAQFEYAPPLVPIASNVTGQLLTDATQPEDWPRYWRDHLRGTVRFAD
GVAAAAKTRATHWIEIGPAPVLAGMAAKGEASFADRPRWLPSLRPSTDDVRTIAEALAAH
WAGGGVVNWRNVWRGREAKRLPLPNYPWKRERFWYDNLHPRGGAIAQAASDASPVLGGRV
PVAAGGELFEAPLDAKTPAWLVDHQVRGSIVAPAAMFVEQALAAAAEIAHDKAAPLRIDG
LAVWHALVAPSEGRLRLQTSVARAASGRRRVTMHSAPSDEPTPRFVEHAEATILEVIKDS
PQAPHERDGFDKRVVESLDRASFYQQIASRGLEYGQAFRVLDDIKRSSYDATATLLPSKA
VAAELSRYRLHPAIGDALLQTIAGTLPLETDGSSSPYTYLPVRIESVRLHRPIEKGEPLS
SYAIRRQPAPDASEPSPELVEADAFLLDGGGKPIASLLGVRVQRLAGSAGEVAKASEPAD
WLYQIEWRPAPLDESAESPWPAGPTIVFADADSGGMGVGDKLVDLVEARGGACVVVRPGA
TFTMRVEDGGPTPRTTVTIDPADASHYERLIGLVAANPSGKPVALVHAWSLDASNWEAAE
SLGVGGAMRLVQQLARRGLATQRGVLFVTRGAQSVGSEGDAFQAATVGLGRVAMMEHPEL
GVRLVDLDAAAGGDELLAELTLADKAENQAAWRAGQRHTARLAKAGALADKVREARDEGT
PPPDAPSWRLEVKRAGSFDALTYKPTPRIAPDAGQVELEVHATGLNFSDVLKALGLYPGL
KPGEVPLGIEASGVVTAVGEGVEHLQVGDEAIGVLPHAFGSHATTRAYAVVRKPAGVTHE
EAATIPIVFLTAHHALVRLAQLERGERVLIHAGAGGVGLAAIQIAQHVGAEIFATAGSDE
KRELLRSLGVKHVMDSRSLDFVHEVREATGGEGVDVVLNSLPGEAIDASLGLLRAYGRFC
EIGKIDIYQDRKLGLLPFQDNLSYFAIDLDRLFRERPKQVERLYAEVMQRFAEGVYHPLP
LTRFAASETADAFRYMSLRKNIGKVVVSMREASKGTVSTPESPAVPGRGYLVTGGLGALG
RQAAQWLVAQGAAGVALLSRREPDSEAESFLQGLRDAGAQAVCLQGDVADRASLHDALAS
LPSDFPRVTGVLHAAGVLDDGLLGDLSAERLAKVLRPKAIGAWNLHEATLDVDSPLSGVT
QFVLFSSVAATLGSPGQANYAAANAALDALAAQRHSLDLPATSIGWGPWAGGEDGSSGAG
MAAGETADAVRAKGMDLLPPRAAFKLMGSLVESAAASVAVFDARWDAMSRLLSGRRTPLL
DDLLTAVEGASSSDGALRQRLLSATPDERETLLVEMVRGELARVTSVAAEEIDVAAPLTA
IGIDSLMALELKNNLEAKLAIMLPMGKLLAGPSVRSLAQAAAEELVGEAIDKTPHAWQPL
VTLREGAASKPALFLMPVLGGDAGAYRHVVEALPAEMPVVAIRPRGLDTDDAPHDDARDT
ARDYAAAIRERQPTGPYHLAGWSTGGITALAVAEELEAAGQEVARVALFDTPPPAVYHDT
DVHDDASFLAAILDFSSRFSGVERPSLSTDQLAGLPEAERFTAALEEAKRAGVIPAEVDE
SYVRRLVAVAEALVLASRGYAPQPHKFGVLFFKPTVEGGLAELSEQTGTNLAAWRTLLGR
ELHEVEVPGDHFSMVSGDGAKRIAAVLAEG
NT seq
7473 nt
NT seq
+upstream
nt +downstream
nt
atggctgacctcgatcgtctggcgaagctctcgccggaacaacgcacgcgcttgcaagaa
cggctcgtctcccgggccgcgtcgaagctccgcgccgccgccagaaccggtgcggctgct
agcaacgcgccgccgccgcgcctcaccgagcccggcgcgccagtcgcgatcgtcggaatg
gcgtgccgcttcggcggcgcgccgaatctcgacgcctactggcggctgatccgtgacggc
atcgaaggtgtcgtcgaagtgcccgccgaccgctggcgcgtggatgactattacaacgcc
gagggtggtccgggcaagacgatcacacgccgcggggcgttcgtcgaagggatcgaccaa
ttcgaaccgacgttctttggggtcacgccgcgcgaagcctcgcgcatggacccgcagcag
cggatgctgctcgaagtcgcctgggaggcgatggagaacgccggttgtcccgccgaccgc
ttggcgggcacagcgacgggcgtctacgtcggcgttggcggcaccgactacaagtccgtg
ccaatccatacggccgagtacttccagctgatcgacgcgcacgtcggcacgggcaacgcg
ttgtcgatcgcttcgaaccgcgtatcgtacgcgctcgacctgcgtgggccgagcatgtcg
gtcgataccgcctgcagcagcagctcgctggcgatccatctcgccgttgaaagcctgcgg
cgcggcgagtgctcgtcggcgctcgccggcggcgtcaatgcgatcatcacgcccgagacg
accatcgccttcagccaggcgcacatgctctcgcccgagggccgctgccgttcgtacgac
gccggcgccggcggctacgtccgcggcgagggctgcgccatggtgctgctcaagcgcctt
gacgatgcgcagcgagacggtgatcaggtgctcggcgtcatcctcggatcggctgtgaac
caagacggccgcacgcccggcatcagcgcgccctcggtgacgcagcaagaggcgtgcctg
cagtcggcgctggccgacgcgggtctccagcccgacgacgtcgattacatcgaagggcat
ggcaccggcacgccgctcggcgaccctatcgagctgcaagccctcgcgcacgtcttccga
aagaaggacgccgatcagcagccgctgtgggtcacgagcgttaaatcgaacatcggccac
accgaaaccgtcagcggcgccgcggggctcatcaagaccgttctcctcatgcagcacgag
gtcgtcccgccgcagctgcacctcgaacgcctcaacccgcacgcgcacctcgaaggctcg
cgcgtcacaccgcttacggagcgtcagcagtggccttcccagcaagcgaatggcggacgc
cgccgtgtggcgggcgtgagttcgttcggtttcggtggcacgaacacgcacctcgtcatc
ggcgaggcgccgctgcctgtcgccatcgagccgaggcccgaacgcacggcgcacgtcctc
aaactcgccgccaaaacgcctgaccgcatccccgagcaagccgctcggcttgccgcgtgg
ttgcgcagcgacgtcggcggcgacgccacggtcgccgatgtcgcgttcacgcacacaacg
ggccgatgcgacttccagcaccgtgtcgccgtcgtcgccgactcgacgcaaacgttgttg
acgcgactcgacaacatcgccgccggcgacatggccgacgatgcgctcgtcgcccgcgac
aagcccggagtcgcttggttgttcacaggccagggcgcgcagcgcgtcggtatgggccgc
gggctctacgaaaccgagcccgtcttccgccgcatcatcgaccgctgcgacgcggcgctc
gccgacgtgctgcctgcgccgctcgttgaagtgctgtacggcggagaagacgacgcccgc
atccaccaaacgctctacacccagcctgccctgttcgccgttgaatgcggattggcggcg
ttgtggaagtcgtggggcgtcgagcccgacgtgctgctcggccacagcatcggcgagtac
gccgccgccgtgaccgccggcgtcatgcgcctcgaagacgccgcgaagctcgtgggcgaa
cgcgcccggctcatgcaatcggcgcccggcgatggcggcatggccgtggtcttcgccgac
gaagcgacggttgcgccggtgctcgtcagccgcgaagcacgtctggcgatcgccgcggtc
aacggcccacagaacacggtgctgtcgggcgacatcgtcgaactcgaagcggcgttaacg
gacctgcgtgggcaaggcgtcgacgcaaagcgcctcgtcgtctcgcatgcgttccactca
ccgttgatggacagcgttctcgacgagtttgagcgcttcgcggcgcaattcgagtacgcc
ccgccgctcgtgccgatcgcgtcaaacgtcaccggtcaactgctcaccgacgctacgcag
cccgaggactggccccgctactggcgagaccacctgcgtggcacggtgcgcttcgccgac
ggcgtcgccgccgccgcgaaaacgcgcgccacgcactggatcgagattgggcccgccccg
gtgctcgccggcatggccgctaagggtgaggcgtcgtttgccgatcgcccgcggtggttg
ccgtcgctgcgcccgagtacggacgacgttcgcaccatcgccgaggcgctcgccgcgcac
tgggcgggaggaggcgtcgtcaactggcggaacgtctggcgaggtcgggaggcgaagcgg
ctgccgctccccaactacccttggaagcgtgaacgcttctggtacgacaatttgcacccg
cgcggcggggcgatcgcccaagcggcgtctgatgcgtcgccggtgctcgggggccgcgtg
ccggtcgccgcagggggcgagttgttcgaggcgccgctcgacgccaagacgccggcgtgg
ctggtggaccatcaagtgcgaggctcgatcgtcgcgcccgctgcgatgttcgtcgagcaa
gcactcgctgccgcggcggagatcgctcacgacaaagcggcgccgctacgcatcgatggc
ctcgccgtgtggcatgccctcgtcgcgccgagcgagggccgcctgcgtttgcaaacgagc
gtcgcgcgcgccgccagcggccgccgtcgtgtaacgatgcactcggcgccaagcgacgag
ccgacgccgcgcttcgtcgaacacgccgaggcgacgattcttgaagtcatcaaggattca
ccgcaagcgccgcacgaacgcgacggcttcgacaagcgtgtcgtcgaatcgctcgaccgc
gccagtttctaccaacagatcgcgtctcgcggcctcgagtacggccaagcgttccgcgtc
ctcgacgacatcaagcgatcctcttacgacgcgacggcgacgctcttgccgagcaaagcg
gtcgcggcggagctgtcgcgttaccgcctgcaccctgcgatcggcgacgcgctgctgcaa
accatcgcggggacgctgccgctcgaaacggacggctccagcagcccctacacgtacctg
cccgtgcggatcgaatcggtgcggttgcatcgaccgatcgagaagggcgaaccgttgtcg
tcgtacgcaatccgccgccagcccgcgcccgacgccagcgagccgagccccgagttggtt
gaggccgacgccttcctgctcgacggcggcggcaaaccgatcgcctcgctcttgggcgtg
cgcgtgcagcgcctcgccggcagcgctggtgaagtagcgaaggcgtcggagcccgccgat
tggctctatcagatcgaatggcgccccgcgccgctcgacgagagcgccgaatcgccgtgg
cccgccggcccaacgatcgtctttgccgacgccgattccggtggcatgggcgtcggcgac
aagctcgtcgatctcgtcgaggcccgcggcggcgcgtgcgtcgtggttcggccgggcgct
accttcacgatgcgcgtcgaagacggcggcccgacgccgcggaccacggtgacgatcgac
cccgcggacgcgtcgcattacgagcggctcatcggccttgtcgcggcgaacccgagcggc
aagcccgtcgcgttggttcatgcgtggtcgctcgacgcttccaactgggaagccgccgaa
agcctcggcgtcggcggggcgatgcggctcgtgcagcagctcgcgcgacgcggtctggcc
acgcaacgcggcgtgctcttcgtcacacgcggcgcgcagtcggttggctccgaaggcgac
gccttccaagccgcgacggtcggcctcggccgcgtcgcgatgatggaacaccccgaactc
ggcgtgcggctggtcgatctcgacgccgctgcgggcggcgatgagttgctcgccgagctg
accctcgccgacaaggcggagaatcaggcagcttggcgcgccgggcagcgtcatacggca
cgactagccaaggccggggcgttggctgacaaggtccgtgaagcgcgggacgaagggacg
ccgccgcccgacgcgccgagttggcgcctcgaggtgaagcgagccggttcgttcgacgcg
ctcacgtacaagccgacgccgcggatcgctcccgacgcggggcaagtcgaactcgaggtc
cacgccacgggcctcaacttcagcgacgtgcttaaggcccttggactgtatcccggtctc
aagcccggcgaggttccgctgggcatcgaggcgtcgggcgtcgtcacggcggttggcgaa
ggcgtcgagcacttgcaggttggagacgaagcaatcggcgtcctaccgcacgccttcgga
tcgcacgcgacgacccgggcgtacgccgtcgtccgcaagcccgcaggcgttacacacgag
gaagcggcgacgatcccgatcgttttcctcaccgcccaccatgccttggtgcggctcgcg
caactcgaacgcggcgaacgcgtcttgatccatgcgggcgccggcggagtgggactagcg
gcaatccagatcgcacaacatgtcggagccgagattttcgccaccgctggcagcgacgag
aagcgcgagctgctgcgctcgctcggcgtgaagcacgtgatggactcacggtcgctcgac
ttcgtccacgaagtgcgcgaagcgaccggcggcgagggcgtcgacgtcgtgctcaactcg
ctccccggcgaggcgatcgacgccagcctcggcctgctgcgtgcgtacggccggttctgc
gagatcggcaaaatcgatatctaccaagaccgcaaactcggcctgttgccgttccaagac
aacttgtcgtatttcgccatcgacctcgaccgcttgttccgcgaacggcccaagcaggtc
gagcgcctgtacgccgaggtgatgcagcgcttcgccgaaggcgtctaccacccgttgccg
ttaacgcgtttcgcggcgagtgaaaccgccgacgcgttccgctacatgtcgctgcggaag
aacatcggcaaagtcgtcgtctctatgcgcgaagcgagcaaaggaacggtctccaccccc
gagagccccgccgtgccgggccggggctaccttgtaacgggcggcctcggcgccttaggc
cgacaagcggcgcaatggctcgtcgcccaaggcgccgctggcgtcgccctcctctcccgc
cgcgaacccgacagcgaggccgagtcgttcctccaaggactccgcgacgccggcgcgcag
gcggtctgcttacaaggcgatgtcgccgaccgtgcctcgctccacgacgccctcgctagc
ctgccgagcgacttcccaagagtaacgggcgtgctccacgctgcgggggtgctcgacgat
ggactactaggcgacctcagcgccgaacgtctcgccaaggtcctccgccccaaggcgatc
ggcgcctggaacttgcatgaggcgacgctcgacgtggattcgccgcttagcggtgtgacg
cagttcgtcctgttctcctccgtcgccgcgacgctcggctcgcccggccaagccaattac
gccgcagcgaacgcggcgctcgacgccctcgcagcgcagcgtcattcgctcgacttgcca
gcgacgagcatcggttggggcccgtgggccggcggcgaggacggttcgagcggcgcgggc
atggccgctggcgagaccgccgacgccgtgcgagccaagggcatggacctgttgccgccg
cgtgcggccttcaagctgatgggctcgctcgtcgagagcgccgccgcatcggtggcggtg
tttgacgcccgttgggacgcgatgtcgcggctgttgtcgggccgccggacgccgctgctc
gatgacctgctgacagcggtcgaaggcgcgtcgtcgagtgacggcgcgctgcgtcaaaga
ttgctctcggcgacgcccgacgagcgcgagaccttactagtggagatggtccgcggcgaa
ctggcgcgcgtgacgagcgtggccgccgaagagatcgacgtcgccgcgccgctgacggcg
attggcatcgactcgctgatggcgctcgagctgaagaacaacctcgaagcgaagctcgcc
atcatgctgccgatgggcaagctgctcgccggtccgagcgtgcgctcgctcgcacaagcg
gcagcggaagagctggtcggcgaagcgatcgacaagacgccgcacgcctggcagccgctg
gtgacgctccgcgaaggcgcggcgagcaagccggcactgttcctgatgccggtgctcggc
ggcgacgcgggcgcttaccgccatgtcgtcgaggccttgcccgcggagatgcccgtcgtc
gcgatccggccgcgcggcctcgacacggacgacgcgccgcacgacgacgcccgtgacacg
gcccgcgactacgccgccgcgatccgtgagcgacagcccacaggcccctatcacttggcc
ggttggtccaccggcggcatcacggcgctggcggtggccgaagaactcgaggccgctggc
caagaggtcgcacgcgtcgcgctgttcgacacgccgccgccggccgtctaccacgacacc
gacgttcacgacgacgccagcttcctggcggcgatcctcgatttctcgtcgcggttctcg
ggcgtggaacggccgtcgctgtcgacggaccaactcgccggcctgcccgaagccgaacgg
ttcaccgccgcgctcgaagaagccaagcgtgcaggcgtgatccccgcggaagtggacgag
tcttacgtccgccgactcgtcgcggtcgccgaggcgttggtgctggcgagccgcggctac
gcgccccagccgcacaagttcggcgtgttgttcttcaagccaaccgtcgaagggggcctc
gccgagctgagcgagcagaccgggacgaacctcgcagcgtggcggacgctgttgggccgt
gaactgcacgaggtcgaagtccccggcgaccacttctcgatggtgagcggcgacggcgcc
aagcgcatcgcggcggtgctggcggagggctag
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integrated database retrieval system