Botrimarina mediterranea: Spa11_04670
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Entry
Spa11_04670 CDS
T09862
Symbol
yjdC
Name
(GenBank) HTH-type transcriptional regulator YjdC
Organism
bmei
Botrimarina mediterranea
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_13_2
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
QDV72293
UniProt:
A0A518K3B6
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Position
582726..583304
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AA seq
192 aa
AA seq
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MPATTREKLADAALRRFYRDGFRNVGIDQVLADVGISKTAFYKHFECKEDLVLLGLERHD
IEAQEMFDRVTREVGGPTALGRLYALFDVVEQIIGDEEFHGCVFVNVAIEFPLPHDPAHV
AAANSKRAVEKMVGDLATEAGADDPAALAHELCLIMEGAYVTRSVGCEGDTISAARRLAR
LAIKSRCGACPQ
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccacgacccgcgaaaagctcgccgacgccgccctgcgacgcttctaccgcgac
gggttccgcaatgtcggcatcgaccaggtcctcgccgatgtcggcatcagcaagaccgcg
ttctacaagcactttgagtgcaaggaagacctcgtgctgctgggcctcgagcggcacgac
atcgaggcccaggagatgttcgaccgcgtcacgcgcgaggtcggcgggccgaccgcgcta
ggccggctctacgcgctcttcgatgtggtggagcagatcatcggcgacgaagaatttcac
ggctgtgtcttcgtcaacgtcgcgatcgagttccccctgccccacgacccggcccacgtc
gccgccgccaatagcaaacgggcggtcgaaaagatggtgggcgacttagcgaccgaagcg
ggcgccgacgaccccgccgcgctcgcgcacgagttgtgcctgatcatggagggcgcttac
gtcacccgcagcgtcggctgcgagggggacaccatctctgcggcgcgacggctggcgcga
ttggcgatcaagagccgctgcggcgcatgtccccagtag
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