Botrimarina mediterranea: Spa11_05920
Help
Entry
Spa11_05920 CDS
T09862
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bmei
Botrimarina mediterranea
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmei03016
]
Spa11_05920 (truB)
Enzymes [BR:
bmei01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Spa11_05920 (truB)
Transfer RNA biogenesis [BR:
bmei03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Spa11_05920 (truB)
Prokaryotic type
Spa11_05920 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QDV72417
UniProt:
A0A518K3R8
LinkDB
All DBs
Position
complement(732365..733264)
Genome browser
AA seq
299 aa
AA seq
DB search
MASLFGLLNINKPAGVTSRDVVNRVQWLLKQHAKATGEKAAKVGHAGTLDPIATGVLVLC
VGPATRLIEQVQRQPKRYRGTFLLGRRSPSDDIELPSEELPDAPIPTLAEIEAALPNFVG
EIEQTPPAYSAIKIGGEKAYDLARAGAAPDMQPRRIRVHELSAVRYEYPELVLDIHCGSG
TYVRAIGRDLANSLGTAAVMSALERTEIGEFRVEDALHMDALDEETVTALLLPAALAVSN
LPRIEVSYTEVQELHNGRFLDRPKAPRGDEMAAFDASGRLIALMKPRGNGRLQPTHVFK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtggctagtctttttggtctgctcaacatcaacaagcccgccggcgtcacgtcgcgcgac
gtggtcaaccgcgtgcagtggctcttgaagcagcacgcgaaggcgaccggcgagaaggcc
gcgaaggtggggcacgcggggacgctcgatccgatcgcgacgggcgttcttgtgctgtgc
gttggccccgcgacgcggctgattgaacaagtccagcggcagccgaagcgttaccgtggc
acgttcctcctcggccgccgcagcccgagcgacgacatcgagttgccgagtgaagagctg
cccgacgctccgattccgacgctcgcggagatcgaagcggcgctgccgaactttgttggc
gagatcgaacagaccccgccggcctactccgcgatcaagatcggcggtgagaaggcctac
gacctcgcccgcgccggcgccgcgcccgacatgcagccgcgacgcattcgtgttcacgag
ctgtcggccgtgcgttatgagtatcccgagttggtgctcgacatccactgcggcagcggg
acgtacgtccgcgcaatcggccgcgacctcgctaactcgctcggcaccgcggcggtgatg
tcggcgctagagcggaccgagatcggcgagttccgcgttgaggatgcgttgcacatggac
gccctcgacgaggaaaccgtcaccgccctgctcttaccggccgcgctggcggtttccaac
ttgccgcggatcgaggtgagttacaccgaggtccaagagcttcacaacgggcgctttctc
gatcgccccaaggcgccccgcggggacgaaatggcggcgttcgacgccagcggtcggctg
atcgctctgatgaagccccgcggcaacgggcgtttgcagccgacgcatgtgtttaagtag
DBGET
integrated database retrieval system
