Botrimarina mediterranea: Spa11_09490
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Entry
Spa11_09490 CDS
T09862
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bmei
Botrimarina mediterranea
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmei03016
]
Spa11_09490
Enzymes [BR:
bmei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Spa11_09490
Transfer RNA biogenesis [BR:
bmei03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Spa11_09490
Prokaryotic type
Spa11_09490
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QDV72767
UniProt:
A0A518K4R6
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All DBs
Position
1165284..1166123
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AA seq
279 aa
AA seq
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MPNNAPVKTLKHGDLTIEGYSRAAVQSYWRLPELSLGFDLGLQPWSFMGTETWFVSHGHL
DHIAALPVYVARRRMMKMDPPVIYVPAEILENVKSLLAAMQRLDRGRLPCELIGVTPGEE
IQLSRELIVTVTPTVHTVPSVGYIVWDRRKKLKPEYEGLEGTQIRDIRLSGIEVSAEVRT
PIVGYLGDTSPKGLDDSPDMYKAKILIAEMTFVSPEHRKEKIHKHGHMHLDDWVERAALF
ENELVIAAHLSTRYHARQAEKMVKEKLPDMLGDRLHLWL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaacaacgcccccgtcaaaacgctcaagcacggcgacctcaccatcgagggctac
agccgcgccgcggtccagagctactggcggctgccggagttgagcctcggcttcgacctc
ggcttgcagccctggagcttcatggggaccgagacatggttcgtctcgcacggacacctc
gaccacatcgcggcgctgccggtgtacgtggcgcggcggcggatgatgaagatggacccg
cccgtcatctacgtcccggccgagatccttgagaacgtcaaatccttgctagccgcgatg
caacggcttgaccgcggccggctgccgtgcgagctgatcggcgtcacgcccggcgaagag
atccagctgtcgcgcgagctgattgtcacggtgacgcccacggtccacacggtgccgtcg
gtgggctacatcgtttgggaccgccgcaagaagctcaagccagagtacgagggcctcgaa
gggacccagatccgcgacatccgcctgtccggtatcgaagtcagcgccgaggtccgcacg
ccgatcgtcggctacctcggcgacacgtcgcccaagggcctcgacgactcgcccgacatg
tacaaggcgaagattctgattgccgagatgacgttcgtctcgcccgagcaccgcaaagaa
aaaatccacaagcacgggcacatgcacttggacgactgggtcgagcgcgccgcgctgttc
gagaacgagctggtgatcgcggcgcacctgagcacgcggtatcacgcgcggcaagcggag
aagatggtgaaggaaaagctacccgacatgctgggcgatcgcttgcatctgtggttgtag
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