Botrimarina mediterranea: Spa11_10630
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Entry
Spa11_10630 CDS
T09862
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
bmei
Botrimarina mediterranea
Pathway
bmei00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Spa11_10630 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bmei01007
]
Spa11_10630 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmei03016
]
Spa11_10630 (lysS)
Enzymes [BR:
bmei01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Spa11_10630 (lysS)
Amino acid related enzymes [BR:
bmei01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Spa11_10630 (lysS)
Transfer RNA biogenesis [BR:
bmei03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Spa11_10630 (lysS)
Prokaryotic type
Other AARSs
Spa11_10630 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QDV72879
UniProt:
A0A518K510
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All DBs
Position
complement(1300383..1302008)
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AA seq
541 aa
AA seq
DB search
MSESQVNQGQSADLTDPVAARRQKLEALAAMGIDPWGQRIDDHTPIAEVRAQAGAVKYRW
ANGKELDLPEFVEGFDFRAWKTAQDAEHGSGEKGEIVGPTFRVAGRVVLFRTAGKLVFVT
LRDQTGDLQLMIGKAQVGESWDLIDKIDLGDIIACDGTLVRTNTGELSIAATGLTFLTKS
LLPPPDKHHGLTDPEAKQRMRYVDMAYNDGVMPRFLARSLIVRSIRTSLAERRFVEAEGP
TLHAIAGGAAARPFTTHHNALDIDLFLRIALELHLKRLMVGGIERVYEMGRVYRNEGISP
RHNPEFTMIELYQAYGDYNSMMDLTEALIIEAIDRLREAGYAPEGYVLPWGDDTIDFTPP
FKRRTYDDLFREYAGCDPNDEAAVAAKAKSMGFAVVDEQGAPRHADVIKSEVFEETVEEA
LVGPIFVTDYPASLCPLTKRKTGAPNVAERFELFIKGMELANAYTELNDPDLQEELFKSQ
LAGLDEAESMAKMDDDFVRALRYGMPPAGGLGIGIDRLVMLLTNSKTIRDVILFPLLRPE
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatcgcaagttaaccagggtcaatcggctgacctgaccgaccccgttgccgcc
cgccgtcagaagctcgaggcgctcgccgcgatggggatcgacccctggggccagcggatc
gacgaccacacgcccatcgccgaggtccgcgcccaggccggcgccgtgaagtaccgctgg
gcgaatggcaaggagctcgacctgccggagttcgtcgagggttttgacttccgtgcttgg
aagacggcgcaggacgccgaacacggtagcggcgagaagggcgagatcgttggccccacg
ttccgcgtcgccggccgcgtcgtgttgttccgcacggcggggaagctcgtcttcgtcacg
ctgcgcgaccagacgggcgacctgcagctaatgatcggcaaggcccaggtcggcgagtcg
tgggacctgatcgacaagatcgacctcggcgacatcatcgcttgcgacggcacgctggtc
cgcaccaacacgggcgagctgtcgatcgccgcgaccggcctgacgttcctcaccaagagc
ctgctgccgccgcccgacaagcaccacggcctcaccgaccccgaggcgaagcagcggatg
cggtacgtcgatatggcgtacaacgacggcgtgatgccgcggttcctcgcgcgcagcttg
atcgtgcggagcatccgcacttcattagcggaacgtcgcttcgtcgaggccgagggcccg
acgctgcacgccatcgccggcggcgccgcggcccggccgtttacgacccaccacaacgcg
ctcgacatcgacctcttcctgcgcatcgcgctcgagctgcacctcaagcggctgatggtc
ggcggcatcgagcgcgtttatgagatgggccgtgtgtatcgcaacgaggggatctcgccg
cggcacaaccccgagttcacgatgatcgagctgtaccaggcgtacggcgactacaactcg
atgatggacctcaccgaggccctgattatcgaggcgatcgatcgtctgcgcgaggcgggt
tacgcgccggagggatatgtcttgccgtggggcgacgacaccatcgacttcacgccgccg
ttcaagcgccgcacgtacgacgacctgttccgtgagtacgccggctgcgaccccaacgac
gaagcagccgtcgccgcgaaggcgaaatcgatgggctttgccgtcgtcgatgagcaaggc
gcgccgcggcacgccgacgtcatcaagagcgaagtctttgaggagaccgtcgaagaggcg
ctcgtcgggccgatcttcgtcaccgactacccggcgagcctctgcccgctcaccaagcgg
aagacgggcgccccgaatgtcgccgagcggttcgagctgttcatcaaagggatggagctg
gcgaacgcctacaccgagctgaacgatcccgacctgcaagaagagctgttcaagagccag
ctcgccggcctcgacgaggccgagtcgatggcgaagatggacgacgacttcgtgcgggcg
ttgcgttacggcatgccccccgcgggcggcctgggcatcggcatcgaccgcctggtgatg
ctgctcaccaacagcaagacgattcgtgatgtgatcctgttcccgctgctgaggccggag
cggtga
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