Botrimarina mediterranea: Spa11_11890
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Entry
Spa11_11890 CDS
T09862
Symbol
rpsA_2
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
bmei
Botrimarina mediterranea
Pathway
bmei03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Spa11_11890 (rpsA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
bmei03011
]
Spa11_11890 (rpsA_2)
Ribosome [BR:
bmei03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Spa11_11890 (rpsA_2)
Bacteria
Spa11_11890 (rpsA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
QDV73002
UniProt:
A0A518K5C5
LinkDB
All DBs
Position
complement(1464774..1466672)
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AA seq
632 aa
AA seq
DB search
MVNRNLLNQYDVSDDDLIAVMGDQELIDETAWLEGEDVSINQIVEGKVIRIDNEFVVVDV
GYKSEGLIPLSEWEPEIEEDPYGNDPEATDFEPPVVPEPEEPPKPGDIIRVLVEDVEDVA
GRHDERGMLVLSKRKAERIEQWMGVMSDVHEGDVVTGTVIRKIKGGLLVDIGVNVFLPAS
QVDIRRPHDIGEYIGKEIKCMVLKIDEERRNIVVSRRSLIEQERATKKAELLKTLSVGDI
RKGIVKNIADFGAFVDLGGIDGLLHITDMSWGRINHPSEMVKIEDNLEVMVLHIDYEREK
IALGLKQKSPSPWEKVPATYPVGTRVKGHVVNVMSYGAFVKLEDGIEGLVHISEMSWTKR
ISHPSELVQVDDEVEVVVLGINQEKQEISLGMKQTQDNPWDRVADRYPPGADVEGRVRNL
TNYGAFIEIEEGIDGLLHVSDMSWTRKVSHPSEVVEKGELLKCKILSVDTERRRIALGMK
QLDEDPWSSDIPNRFQPGDLVKGKVTKITNFGVFIGLEDGLEGLLHVSELSDQKIENPEE
ICNVGDEMEVKILRVDIDERKIGLSRKRVDWAEEEAGAEGETEAVGATSTASSASNENLK
GGIGSGEGPLFKAPTADVGADTDADSDSGSED
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaccgcaacctcctcaaccagtacgacgtttccgacgacgacctcatcgccgtg
atgggcgatcaggagctcatcgacgagacagcgtggcttgagggcgaagacgtctcgatc
aaccagatcgtcgaaggcaaggtcatccgcatcgacaacgagttcgtcgtcgtcgacgtc
ggctacaagagcgaaggcctgatcccgctgtcggagtgggagccggagatcgaggaagac
ccgtatggcaacgaccccgaggcgacggacttcgagccgccggtcgtgcccgagccggaa
gagccgccgaagcccggcgacatcatccgcgtgctggtcgaggacgttgaggacgtcgcc
ggccgccacgacgagcgtggcatgctggtcctctcgaagcgtaaggccgagcggatcgag
cagtggatgggcgtcatgtccgacgtccacgagggcgacgtcgtcaccggcaccgtgatc
cgcaagatcaagggcggcctcctggtggacatcggcgtcaacgtcttcttgccggccagc
caggtcgatatccgccgtccgcacgacatcggcgagtacatcggcaaagagatcaagtgc
atggtgctcaagatcgacgaggagcgccgcaacatcgtcgtcagccgccgcagcctgatc
gagcaagagcgcgccaccaagaaggccgagctgctcaagaccctctccgtgggcgatatc
cgcaagggcatcgtcaagaacatcgccgacttcggcgcgttcgtggacctgggcggcatc
gacggcctgctgcacatcaccgacatgagctggggccggatcaatcaccccagcgagatg
gtgaagatcgaggacaacctcgaggtgatggtcctccacatcgactacgaacgtgagaag
atcgccctgggcctcaagcagaagtcgcccagcccgtgggagaaggtaccggcaacctac
ccggtcggcacccgcgtgaagggccatgtcgtcaacgtcatgagctacggcgccttcgtc
aagctcgaggacggcatcgagggcctggtgcacatctccgagatgagctggaccaagcgc
atcagccaccccagcgagttggtgcaggtcgatgacgaggtcgaggtcgttgtcttgggc
atcaaccaagagaagcaagagatctcgctcggcatgaagcaaacccaggacaacccctgg
gaccgtgtcgccgaccgttacccgcccggcgccgacgtcgagggccgtgtccgcaacctc
accaactatggcgcgttcatcgagatcgaagagggcatcgacggcctgctccacgtctcg
gacatgagctggacccgcaaggtcagccacccgagcgaggtcgtcgagaagggcgagctg
ctcaagtgcaagatcctctcggtcgacaccgaacgccgccggatcgccctgggcatgaag
cagctcgacgaggacccgtggtccagcgacatccccaaccgcttccagcccggcgacctt
gtgaagggcaaggtcacgaagatcaccaacttcggtgtcttcatcggcctggaggacggc
ctcgagggcctgctgcacgtctcggagctctccgatcagaagatcgagaaccccgaagag
atctgcaacgtcggtgacgagatggaggtcaagatcctccgcgtcgatatcgacgagcgc
aagatcggcctcagccgcaagcgggtcgactgggccgaggaagaagccggcgccgagggc
gagaccgaagccgttggcgcgacctcgacggcttcgtcggcctccaacgagaacctcaag
ggcggcatcggctccggcgagggcccgctcttcaaggcgcccaccgcggacgtgggcgct
gacacggacgccgactcggattccggttcggaagactga
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