Botrimarina mediterranea: Spa11_12800
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Entry
Spa11_12800 CDS
T09862
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
bmei
Botrimarina mediterranea
Pathway
bmei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Spa11_12800 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmei03021
]
Spa11_12800 (rpoZ)
03400 DNA repair and recombination proteins [BR:
bmei03400
]
Spa11_12800 (rpoZ)
Enzymes [BR:
bmei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Spa11_12800 (rpoZ)
Transcription machinery [BR:
bmei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Spa11_12800 (rpoZ)
DNA repair and recombination proteins [BR:
bmei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Spa11_12800 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
SIS_2
Motif
Other DBs
NCBI-ProteinID:
QDV73091
UniProt:
A0A518K5L9
LinkDB
All DBs
Position
1566650..1566916
Genome browser
AA seq
88 aa
AA seq
DB search
MIEALKEEEIVNKVGGRFKLSTLIQKRLVALNGGARPLVHVDTHDKMEIVVQEILQDKIY
LDAASEVQIASDHSSASSSSIDFDFDSI
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcgcttaaagaagaagagatcgtcaacaaggtcggcggacgcttcaagctg
tcgacgctgatccaaaagcggctggtggccctcaacggcggcgcccgcccactggtgcac
gtggatacgcacgacaagatggagatcgtcgtccaggagatccttcaggacaagatttac
ctcgacgccgcgagcgaagtgcagatcgccagcgaccattccagcgctagcagcagctcg
atcgacttcgacttcgatagcatctga
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