Botrimarina mediterranea: Spa11_13130
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Entry
Spa11_13130 CDS
T09862
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bmei
Botrimarina mediterranea
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmei03400
]
Spa11_13130 (addA)
Enzymes [BR:
bmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spa11_13130 (addA)
DNA repair and recombination proteins [BR:
bmei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Spa11_13130 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
QDV73122
UniProt:
A0A518K5P7
LinkDB
All DBs
Position
complement(1600928..1604431)
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AA seq
1167 aa
AA seq
DB search
MTRPTSNEPTYTEEQSKALSAGTGSIAIDAGAGCGKTFVLTERFLSHLDPENEATVTASF
DELVAITFTDAAAREMRNRIREKCRERLLNAKGDRVGFWRTMLRSLDAARVSTIHSFASG
LIRDHAIELGIDPAFSVLDPAEAAVLKSAAIDDALRQQLAPRDGQAADDLIATAAEFDLG
GLRDRIHLLVKDATSPDFRRWLRAKPDDLVTAWRAFYVEHVAPRYAQEFLQSPLVTELLE
LITTATPVKEGFIDWIIDFGAAIRAIPDAKDQDDALRALRRMLDFRVAGRGDLCGVKDWP
DKESKARFTALLKAMRDVLDKQRRAGDPESMRRAAELGIQLQHLAADAAKHYRNAKRERG
VLDNDDLLVEAHRLLTDKALEDARRRIAGRVRVLLVDEFQDTDPLQAELVQAILGDGSDG
GEEDRTLFFVGDFKQSIYRFRGAAPEVFEQMQAATPPGGRLTLSKNFRSQPAVLDFVNTM
FAPIFGEKYLPLRSSRPQVGPRPAVEMLWTPPEEDQSVPAQRTAEAATIAARIRQLIDDK
APLIYDKESDAARPATPGDFAILFRALSDVAAYEQALREAGLPYYLVGGHAFYAQQEVYD
VLNLLRAVLSECDEIALAGVLRSPLFGLTDETLFWLARSGGLSGGLFQSKLPRELLDDDA
RKAAQARDVLTALRRDKDRLGAAELLRRAFDATGYDATLVAEFLGERKLANLEKLHEQAR
EADASGSGLRGFAARLTEFIHSPPKEALAATTEGDADVVRLMTVHASKGLEFPIVVLPDL
NRKTRGDTTTAVFDRRLGPLVKPTLRPEDDDKKGPPIGLDFWKAAEKPLDDEERDRLFYV
ACTRAADRLILSSSYGAAVTKLEGPWIVRLNERFDLATGQLLDDDRAERFVEVVPLPPPA
SDAGEAKRRTLHEAIEAIDAGKVKAAAAPQAVAPITVSPDEIVTFSVSRIGGELRRDAAP
STEEADGASKGVDPRRLGTLVHAIIERLDPTASNWDNAINSWADAQALQELRRDIAKGAA
EAKRLVKRFVTTPEWAAMCAAPRLEREAEFLLPWPMPDGSPPAAIRGYLDALYQDASGGW
HLVDYKTNATAAAGVPILAEHYALQMAVYAHAIEAATGQRPASLTLVFLAAGVSHAVPWD
DKAHAESALAITEAIANARQSTAEAEQ
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccccaccagcaacgagcccacctacaccgaagaacagtcgaaggccctctcg
gcgggcacgggctcgatcgccatcgacgccggcgccggctgcggcaagacgttcgtgctc
accgagcgattcctttcgcacctcgaccccgagaacgaggcgaccgtcacagcgtcgttc
gacgagcttgtcgcgatcacgttcaccgacgctgccgcgcgcgagatgcgtaaccgcatc
cgggagaagtgccgcgaacggctcttgaacgcgaagggggatcgcgtcggcttttggcgc
accatgctgcgttcgctcgatgcggcgcgagtctcgacgatccactcgttcgccagcggc
ctgatccgtgaccacgccattgagctgggcatcgacccggccttctcggtgctcgacccg
gccgaggcggcggtgctgaagtcggccgcgatcgacgacgccctgcggcaacagctcgcc
ccccgcgacggccaggcggccgacgacctgatcgccaccgcggcggagttcgacctcggc
ggtctgcgggaccgcatccacctgctcgtcaaggacgccacttcgcccgacttccggcgc
tggctccgcgcgaagcccgacgacctcgtgacggcgtggcgggcgttctacgtcgagcac
gtcgccccgcgttacgcacaagagttcttgcagagcccgctcgtcacggagctgctcgaa
ctgatcacaaccgcaacgcccgtcaaagagggcttcatcgactggatcatcgacttcggc
gccgcgatccgcgcgatccccgacgcgaaagaccaagacgacgccctgcgggcgctgcgg
cggatgctcgacttccgcgtcgccgggcgcggcgacttgtgtggcgtcaaagattggccc
gacaaagaatcgaaggcgcggttcaccgccctgctcaaagcgatgcgggacgtgctcgac
aagcagcgtcgcgccggcgaccccgagtcgatgcgccgcgccgccgaattgggcatccaa
cttcaacacctcgccgccgacgccgccaagcactaccgcaacgcgaagcgcgagcgcggc
gtcctggacaacgacgacctcttggtcgaagcccaccggttgctgacggacaaggcgctc
gaagacgcccgccgccgcatcgcggggcgcgtacgggtcttgcttgttgacgagttccaa
gacaccgacccgctgcaagccgagctggttcaagcgatcctcggcgacggcagcgacggt
ggtgaggaagaccgaacgctgttcttcgtcggcgacttcaagcaatcgatctaccgcttc
cgcggcgcggcgccggaggtctttgagcagatgcaagcggcgacgccccccggcgggcgg
ctgacgctctccaagaacttccgcagccagccggcggtgctcgacttcgtcaacacgatg
ttcgcgccgatcttcggcgagaagtacctgccgctgcggtcgagccgcccacaggtcggc
ccacggcccgcggtcgagatgctgtggacgccgcccgaagaagaccagagcgtccctgcg
caacgcaccgccgaagccgcgacgatcgccgcccgtatccggcagttgatcgacgacaag
gcgccgctcatctacgacaaagagagcgacgccgcccgtcccgccacgcccggcgacttc
gcgatcctgttccgcgcgctcagcgacgtggccgcgtacgagcaagcgttgcgcgaggcg
gggttgccctactaccttgtcggcgggcacgccttctacgcacaacaagaggtctacgac
gtcctcaaccttctgcgggcggtgctcagcgaatgtgatgagatcgcgctggctggcgtg
ctgcggagcccgctgtttggcctcaccgacgagacgctcttctggctcgctcgcagcggc
ggtctctcgggagggctcttccagtcgaagctgccgcgcgagctgctggatgacgacgct
cgcaaagcggcgcaggcccgcgacgtgctcaccgcgctgcgccgcgacaaggaccgcctc
ggcgccgccgaactgttgcgccgagcgttcgacgccacgggatacgacgcgacgctcgtc
gccgagtttctcggcgagcgcaagctggcgaaccttgaaaagctccacgagcaggcgcgc
gaagcggacgcgtcgggctcgggcctgcggggtttcgccgcgcggctgacagagttcatc
cactcgcccccgaaggaagcgctcgccgccacgaccgagggggacgccgacgtcgtgcgg
ctgatgacggtgcacgcctcaaagggcctggagttcccgatcgtcgtgctccccgacctc
aaccgcaagacgcgtggcgacaccacgacggcggtcttcgatcggcggctcggcccgctg
gtcaagccgacgctgcgtcccgaggacgacgacaagaagggcccgccgatcggcctggac
ttctggaaggccgccgagaagccgctcgacgacgaagaacgcgaccggctgttctatgtc
gcctgcacccgggcggccgaccggctcatcttgtcgagctcctacggcgccgcggtgacg
aagctcgaaggcccctggatagtgcggctcaacgagcggttcgacttggcgacaggccag
ctgctcgatgacgaccgcgccgagcgcttcgtcgaggtcgttccgctcccaccgcccgct
tcggacgccggtgaagcgaaacggcgaacgctacacgaagcgatcgaagccatcgacgcc
ggcaaggtgaaagccgccgccgcgccgcaagccgtcgcgccgatcaccgtatcgcccgac
gagatcgtgacgttcagcgtctcacggatcggcggcgagttgcggcgtgacgcggcgcca
tcgaccgaagaggccgacggcgcgagcaagggcgtcgatccccggcggctcggcacgttg
gtccatgcgatcatcgagcggctcgaccccacggcgagcaactgggacaacgcgatcaac
tcgtgggccgacgcccaggcgctgcaagagctacgccgcgacatcgccaagggcgccgcg
gaagcgaagcggctcgtgaagcggttcgtcacaacgcccgaatgggccgcgatgtgtgcg
gcgccgcgacttgagcgcgaggcggagttcctcttgccgtggccgatgccggacggatcg
ccaccggcggccatccgtggttatctcgacgcgctgtaccaagacgccagcggcggctgg
catttggtcgattacaaaacgaacgccaccgccgcggccggtgtccccatcctggcggag
cactacgcgctgcagatggcggtctacgcccatgcgatcgaggcggccacgggccagcgg
cccgcatcgctgacgctggttttcctcgcagcgggcgtgtcgcacgccgtcccctgggac
gacaaggcgcacgctgaatcggcgctggcaatcaccgaagcgatcgccaacgcccgacaa
tcgaccgcagaagcggagcagtga
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