Botrimarina mediterranea: Spa11_13450
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Entry
Spa11_13450 CDS
T09862
Symbol
outD_1
Name
(GenBank) Type II secretion system protein D precursor
KO
K02280
pilus assembly protein CpaC
Organism
bmei
Botrimarina mediterranea
Pathway
bmei02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Spa11_13450 (outD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bmei02044
]
Spa11_13450 (outD_1)
02035 Bacterial motility proteins [BR:
bmei02035
]
Spa11_13450 (outD_1)
Secretion system [BR:
bmei02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
Spa11_13450 (outD_1)
Bacterial motility proteins [BR:
bmei02035
]
Pilus system
Pilus assembly proteins
Spa11_13450 (outD_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
QDV73152
UniProt:
A0A518K5T6
LinkDB
All DBs
Position
complement(1650476..1652308)
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AA seq
610 aa
AA seq
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MYDLTASQMLRSLRRVLALSLSAVCFTTAPQVAVGQMTDNGSVVRRIENTTDRMEITTNT
SRILTLDKKIPKVQVNNPELLAVTPLSATEIQVSAKKAGVTQVNLWDEDGEIHTVDVFIY
GDVRELEHALATQFPHSSVRVYRYSNSLVLTGFIDRPDYVDPIRQLAEDYAPKVINNISV
GGVQQVLLKVKIYEVSRTKLRQLGVDIATAGNHGYFGTSVSGLLNNIGTAGNPAGLVQGV
AGAKVISDTAGQTVEFAVTDGSDALFGFIRALQEKNVAKILAEPNIAAVSGRPATFRSGG
QIPIPVPQGLGTIAIEYKEFGTQVDFLPIVLGNGKIRLEVRPSVSDLDYSNSIAISGTTI
PGIKDRMADTAVEMNAGQTFAVAGLIQQRSATSNRGIPLLADIPILGVPFRSTLDDSEEV
ELLILVTPELVDAMDPYEVPPCGPGMGTVSPSDCDLYIDGKVEVPNTCGPCVNGGCGSCP
PCVAGGFPGPPRQLVNGQAGGRMTPSQQFDSPTSYGPTPEMAPYPAEAVPAEGASMQQGP
SFYHSGSNSPAPTTEGADEPTRTGPPVHYRASTPQGLVRQAARPYQPSAIKPMTTVSDSG
LIGPVGYDEE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacctcaccgccagccagatgctccgctcgttgcggcgcgtgctcgcgctctcg
ctaagcgcagtgtgtttcacgacggcgccccaggttgcggtcggccaaatgaccgataac
ggttcggtcgtgcgccggatcgagaacacaaccgaccgcatggagatcacgaccaatacg
agtcggatcctcacgctcgacaagaagatccccaaggttcaggtcaacaaccccgagctc
ctggccgtcacgccgctgtcggcgacagagatccaggtctcggcgaagaaagccggcgtc
actcaggtcaacctgtgggacgaagacggcgagatccacacggtggatgtcttcatctac
ggcgatgtccgcgaactggagcatgccctggcgacacagttcccacactcgtcggttcgc
gtctaccgctacagcaacagcctcgtgctgacaggcttcatcgatcgtcccgactacgtc
gatccgatccgtcagcttgccgaagactacgcccctaaagtaatcaacaacatctccgtg
ggcggcgtccaacaggtgctgttgaaggtcaagatctacgaggtgagccgcaccaagctc
cgccagctaggcgtcgatatcgcgactgccggtaatcacggatacttcgggacgagcgtg
tccggcctgcttaacaacatcggcactgcgggcaaccccgcgggcttggtccagggcgtc
gctggcgccaaggtgatttccgacaccgctggccagaccgtcgaattcgcggttaccgat
gggtcggacgcgctgttcgggttcattcgcgccttacaagagaagaacgtagcgaagatc
ctcgccgagccgaacatcgcggctgtcagcgggcgccccgcaacgttccggtccggtgga
cagattccgattcccgtgccgcaaggcttgggcaccattgccatcgagtacaaagagttt
gggacccaggtcgacttcctgcctatcgttctcgggaacggaaagatccggcttgaagta
cggccgagtgtgagcgacctggactactccaactcgattgcgattagcggtacgacgatt
cccggcatcaaggatcggatggcggacacggcggtggaaatgaacgcaggccagaccttt
gctgtggccggtctcatccagcagcgcagcgcgacgtcgaaccgtggcattcccctgctt
gccgacatccccattctgggcgtccccttccggagtacgcttgacgactccgaagaggta
gagctgcttatcttggtgacgcctgaattggtcgatgcgatggacccgtacgaggtgccg
ccgtgtggtccgggcatgggcaccgtctcgcccagtgactgcgacctgtacatcgacggc
aaggttgaagtcccgaacacctgtgggccctgtgtcaacggaggctgtggttcgtgcccg
ccctgcgtcgcgggtggattccccggcccgccgcggcagttggtgaacggccaagcaggc
ggccgcatgaccccgtcacagcaattcgactcgccgacgagctacgggccgacgcccgag
atggcgccctacccggccgaagcggttcctgccgaaggcgcctccatgcaacaaggcccg
agcttctatcacagcgggtcaaactcgccggcgcccacaacagaaggcgccgacgagccg
acccggaccggcccaccggtccactaccgcgcctcgacgccgcagggcttggtgcgtcag
gcggctcggccttaccaaccctcggccatcaaaccgatgacgacggtcagcgattccggt
ttgatcggtccagtgggttatgacgaagagtga
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