Botrimarina mediterranea: Spa11_16520
Help
Entry
Spa11_16520 CDS
T09862
Symbol
sigA_4
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
bmei
Botrimarina mediterranea
Pathway
bmei02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Spa11_16520 (sigA_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmei03021
]
Spa11_16520 (sigA_4)
Transcription machinery [BR:
bmei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Spa11_16520 (sigA_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
HTH_10
Sigma70_r1_2
DRC7_C
Motif
Other DBs
NCBI-ProteinID:
QDV73456
UniProt:
A0A518K6P0
LinkDB
All DBs
Position
2004888..2005886
Genome browser
AA seq
332 aa
AA seq
DB search
MATLNPPVRRAPSATVTKAKSAKAATKPKGPSSKRPNRPTALDRRVEELRRVEIDYIPND
SFCLANDEPTGLAAEVERGDAPAEALAAGLPAHLGRMSATRLLTPEEERDLFRRMNYCKF
RAQALRSKLGRTAPSAARVAEIEDCLRRVTRLRNHLIQANTRLVMSIARRFANSSNSFDD
LLSHGIVSLMHAIEKFDYDRGYRFSTYATCAVRRDLCRHVMTQRRDSQRFSTGADLLLND
VGAEPGDAQHLSEPEWGVLNSSLVQMIQRLDERERFIVTHRFGLGDGAKRASYNRLGQRM
GISKERVRQLANRAMEKLREWAPDYRLEALVS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgctcaaccctcccgtccgccgcgccccgtctgccaccgtcaccaaggcgaag
tccgccaaagcggccaccaaaccgaaaggcccttcaagcaagcgtcccaaccgcccgacg
gctttggatcgccgggtcgaagagctccggcgtgttgagatcgattacatccccaacgac
agcttttgcttggccaacgacgagccgactggcctagccgccgaagtcgagcgtggcgac
gctcctgccgaagccctcgccgcgggtctgccagcgcatctcggccgcatgtctgcgacg
cgactgctcaccccagaggaggaacgtgacctcttccgccggatgaactattgcaagttc
cgggcgcaggcgttgcgatcgaagctcggccgcacggcgccctcggcggctcgggtcgcc
gagatcgaggattgcttgcggcgtgtgacgcggctgcggaaccacctgatccaggcgaac
acccgactcgtgatgtcgatcgcccggcggttcgccaacagctcgaactccttcgacgac
ctcctgagccacggcatcgtttcgctgatgcacgccatcgaaaagttcgactacgaccgc
ggctatcgattcagcacctacgcgacgtgcgccgtgcggcgcgacctctgccgtcacgtg
atgacgcagcggcgagactcacagcggttcagcaccggcgcggacctgctgctcaacgac
gtcggcgccgagcccggcgacgcccagcacctcagcgaacccgagtggggcgtactcaac
tcgtctctcgtgcagatgattcagcgcctcgacgagcgcgagcggttcatcgtcacccac
cgctttggcctcggcgacggcgccaagcgggcctcctacaaccggctcggacagcggatg
ggcatctcgaaggaacgcgttcggcagctcgccaaccgggcgatggagaagctgcgcgaa
tgggcgcccgattatcgactcgaggctttggtaagctga
DBGET
integrated database retrieval system
