Botrimarina mediterranea: Spa11_16590
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Entry
Spa11_16590 CDS
T09862
Name
(GenBank) FAD binding domain of DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bmei
Botrimarina mediterranea
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmei03400
]
Spa11_16590
Enzymes [BR:
bmei01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Spa11_16590
DNA repair and recombination proteins [BR:
bmei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Spa11_16590
Prokaryotic type
Spa11_16590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lenti_VIF_2
DUF7239
Methyltransf_3
Motif
Other DBs
NCBI-ProteinID:
QDV73463
UniProt:
A0A518K6N6
LinkDB
All DBs
Position
complement(2011949..2013466)
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AA seq
505 aa
AA seq
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MPTIESAVPKIRLSSGHGERLVDVKADGDYILYWMTAFRRPRWNLALERAVDWARGLEKP
LVVFEALRVDYRWACDRFHTVVAEGMRDNREAFADIDGVCYYPYLEPEPGAASGLLAAFA
ERACVVVGDDFPSFFLPAQARAARRAIGCRYELVDSNGLYPLRATDNVFSRAFDFRRQLH
KDLLPHLSELPKPAPLQGTRLPSAQGVVDAIQKKWRPVQDADLEAPAKLIASLPIDHSVK
PVEKEPGGYIAAGKALDRFMGKRFEVYGERRNQPEEDAASELSGYLHWGHLSAHEVFAAV
AEHENWNPSKAAKKPTGAREGWWNMSPTAEAFLDELVTWREVGFNMTSKRRDYDRYESLP
DWAQATLAEHAGDQRDPLYTLEELEGARTYDELWNASQRQLVREGRIHNYLRMLWGKKIL
EWSESPRAALDVMIELNNKYALDGRNPNSYSGIFWVLGRYDRAWGPERPIYGKIRYMTSE
NTARKVRVKDYVRRYAADAERSLFD
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcctacgatcgaatccgcggtcccgaagatccgcctcagctctggccacggcgagcgg
ttggtcgatgtgaaggctgacggcgactacatcctttactggatgaccgcgtttcgccgg
ccgcggtggaaccttgcgctggagcgtgcggtcgattgggcgcgggggcttgaaaagccg
ctggtggtcttcgaagcgttaagggtggactaccggtgggcttgcgaccgatttcacacg
gtcgtcgccgaggggatgcgcgacaaccgcgaggcgttcgccgacatcgatggcgtttgc
tactacccttacctcgaaccagagcccggcgccgccagcggcttgcttgcggcgtttgcg
gagcgggcgtgtgttgtcgttggcgatgactttccgagtttcttcctgccggcgcaggcc
cgagcggcgcggcgggcgattggttgccgttatgaactcgtcgactccaacggcctctac
ccgctccgcgccaccgacaatgtcttttcgagggcgttcgatttccgtcggcagttgcac
aaggacttgctgccgcatttgagcgagcttcccaagcccgcgccgctgcaagggacgcgt
ctgccctcggcgcagggagtcgtcgatgcgattcagaagaagtggcgtcctgtccaagac
gccgacctcgaagcgcccgcgaagttgattgcgtcgttgccgatcgatcactcggtaaag
ccggtggagaaagagcccggcggttacatcgcagcgggtaaggcgctcgatcgcttcatg
ggaaagcgattcgaggtctacggcgagcgccgcaaccagcccgaagaagacgccgccagt
gagctgtcgggctacttgcactgggggcatctgtcggcgcacgaggtcttcgccgccgtc
gccgagcatgagaattggaaccccagcaaagccgctaagaagcctactggcgcgcgggag
ggctggtggaacatgagcccgaccgccgaggcattcctcgacgagctcgtcacgtggcgc
gaagtcggtttcaacatgacgagcaagcgacgcgactacgaccgttacgagtcgctgccc
gactgggcccaagcaacgcttgccgaacacgccggcgaccagcgcgacccgctctacacg
ctcgaagagttggaaggcgcccgcacgtacgacgagctctggaacgcctcgcagcggcaa
ctggtgcgcgagggccgcatccacaactacctgcggatgctgtggggcaagaagattctt
gaatggagcgaatcgccccgagcggcgctcgacgtgatgatcgagctgaacaacaagtac
gccctcgacggccgcaaccccaacagctactcgggcatcttctgggtgctcggtcgttac
gaccgcgcctggggtcccgagcgccccatctacggcaaaatccgctacatgacgagcgag
aacacggcgcggaaggtgcgggtgaaggactatgtgaggcgatatgcggcggacgccgag
cggtcgttgtttgattga
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