Botrimarina mediterranea: Spa11_20240
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Entry
Spa11_20240 CDS
T09862
Symbol
xylR_3
Name
(GenBank) Xylose operon regulatory protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
bmei
Botrimarina mediterranea
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bmei03000
]
Spa11_20240 (xylR_3)
Transcription factors [BR:
bmei03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Spa11_20240 (xylR_3)
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Ortholog
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GFIT
Motif
Pfam:
Peripla_BP_3
HTH_18
HTH_AraC
PBP1_XylR
Peripla_BP_4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QDV73825
UniProt:
A0A518K7R9
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Position
complement(2456350..2457507)
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AA seq
385 aa
AA seq
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MAPRPRVALDVETSRVYGRGILKGISSYLVSSRPWSIYIEQHEIGGDVRRLLSRWGGDGI
ITRQLTSDAKEAIQSLGIAAVDLSNFQPSMGLPRICSADSACGRVGAQHFIERGFKHFAC
CSYRGQYWSQQRAEGYAREVAFSNHDCAVYEQPFRVQAQKWDQDQNRLAEWLAELEKPVG
VLATNDLLGHHVLDACGRAGLMVPEQVAVLGVDNDELLCNLTNPPMSSIVLDPERIGFEA
AKKLDQIMTGGGADAAEEEVTEIPSRGIVVRRSTDIFAVPDPEIARALRYIREHACEGVT
VQDVLDYMNVSRSWLERGFREHFGRSPKAEIRNVQIARCKELLRMTDLSLEGIARLAGFK
HTEYMGVMFKREMGLSPGKYRNSYS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggctccacgtccccgcgttgcccttgatgtcgagacttcccgtgtttatggacgagga
atcttgaaggggatttccagctatctcgtttccagccgaccctggtcgatctacatcgag
caacacgagatcggtggtgatgtgcgccgtcttctctcacgctggggcggggacgggatc
atcacccgtcagctcaccagcgacgcaaaagaggccatccaaagcttaggaattgccgcc
gtcgatttgagcaatttccagccgagtatgggtcttcctcgcatctgttcggccgacagc
gcgtgcgggcgtgtgggagcccaacacttcatcgagcggggcttcaaacatttcgcctgc
tgcagttaccgggggcagtattggtcacagcagcgagccgagggatacgcccgcgaagta
gccttttcaaaccacgactgcgctgtctatgagcagccgttccgagtccaggcgcagaaa
tgggaccaagatcagaatcggctcgccgagtggcttgccgaattagagaagcccgttgga
gtgctcgccacaaatgacctactagggcaccacgtcctcgatgcttgtgggcgcgctgga
ttgatggttcccgagcaggtcgccgtcctaggagtcgacaacgacgaactcttatgcaat
ctaactaacccccccatgtcgagcattgtcctcgatccagaacgtatcggctttgaggcg
gcgaaaaaactagatcagatcatgaccggggggggcgctgatgctgcagaagaggaagta
acagagataccatcacgcggcattgtggtgcggcggtccacggatatcttcgcggtgccc
gatcccgaaatcgcccgtgcactgcgctatatcagagagcacgcttgcgagggcgtcacc
gtccaggacgttctggattacatgaacgtctcaagaagctggctcgaacggggattccga
gagcatttcggccgctcacccaaagccgaaataaggaacgtccagatcgccagatgcaag
gagcttctacggatgaccgatttgtcgctagaaggcatcgcgaggctggccggcttcaaa
cacacagagtacatgggcgtcatgttcaaaagggagatgggcttgtcaccaggtaagtac
cgcaacagctacagctaa
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