Botrimarina mediterranea: Spa11_20870
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Entry
Spa11_20870 CDS
T09862
Symbol
degA
Name
(GenBank) HTH-type transcriptional regulator DegA
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
bmei
Botrimarina mediterranea
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bmei03000
]
Spa11_20870 (degA)
Transcription factors [BR:
bmei03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Spa11_20870 (degA)
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
HTH_31
HTH_3
TetR_N
HTH_IclR
DprA_WH
HTH_10
HTH_38
HTH_24
HTH_23
HTH_6
MarR
HTH_Tnp_ISL3
TrmB
HTH_7
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QDV73888
UniProt:
A0A518K7W1
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Position
complement(2561489..2562487)
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AA seq
332 aa
AA seq
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MAVTIDEIAERAGVSASTVARVLRGDVKGVQERSARKAREILRISEELGYRPNWRARALS
RGKTHTIGLLYSNPKWIFEDPMNEIASSFTETLQEENYDLRLVPVTATSDWKELVLGGAV
DGLAFLLHVPEPAQPLVLAGRLPTILLGEKFGGLQHVVADDVAGGKLAARHLIGLGHKRI
ALYVNDSIRDHVSIHERRQGFEQAMRDAGLESKAEVWRCTTEDAMQRILSADAPTAVVCY
CHVEALELTHAAWVNGVAIPTDLSLISFNDISATRYTTPPMTVIGFDTAELGRIGARRLA
ARIASPEEATDENTVVREQLVLRGTTAPPSSR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcacgatcgacgaaatcgccgaacgagccggggtttccgcctccaccgtcgcg
cgggtgctgcgcggcgatgtgaaaggcgttcaagaacgcagcgctcgcaaggcgcgggag
atcctgcggatctcggaggagcttggctaccgccccaactggcgcgcccgcgccctttcg
cgggggaagactcacacgatcggactgctctactcgaaccccaaatggatcttcgaagac
ccgatgaacgagatcgcctcttcgttcacggagacccttcaagaagagaactacgacctt
cgcttggtccccgtcacagcgacgagcgattggaaagagctggtgctcggcggagctgtg
gacggcctcgccttcctgcttcacgtccctgaaccggcccagccgctggtcttggcgggt
cggctccctacgatcctgctaggcgagaagttcggcgggctccagcacgtcgtcgccgac
gatgtggcggggggcaagctcgccgctcgccacctcatcggattggggcacaagcggatc
gcgctgtacgtcaacgactcgatacgcgaccacgtcagcatccatgaacggcgccaaggc
ttcgagcaagccatgcgcgacgccgggctcgagtcgaaggccgaggtttggcggtgcacc
accgaagacgctatgcagcgcatcctctccgccgacgcccccacggcggtggtctgctac
tgccatgtcgaagcgctcgagctgacgcacgccgcgtgggtgaacggcgtcgcgatcccc
accgacctgagcttgatctcgttcaacgacatttcggcgacacgctacaccacgccgccg
atgacggtgatcggattcgacacggcggagctaggccgcatcggcgcgcggcgcctcgcg
gcacggattgcttcgccagaagaagcgaccgatgagaacaccgtcgttcgcgaacaactc
gtgctccgtggaacgacggcgccgccgtcttcacgctaa
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