Botrimarina mediterranea: Spa11_22760
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Entry
Spa11_22760 CDS
T09862
Symbol
cnrH_3
Name
(GenBank) RNA polymerase sigma factor CnrH
KO
K24073
RNA polymerase sigma factor CnrH
Organism
bmei
Botrimarina mediterranea
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmei03021
]
Spa11_22760 (cnrH_3)
Transcription machinery [BR:
bmei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Spa11_22760 (cnrH_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
Apolipoprotein
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QDV74077
UniProt:
A0A518K8I0
LinkDB
All DBs
Position
complement(2839635..2840240)
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AA seq
201 aa
AA seq
DB search
MPKFGVKVPEGVAHISSVMAGREQHESDRRCDFATLWAESYDKLRTYVRIFVPVLHDADD
VLQDTAVAIAKDFDKYDPERPFLEWAVGVARNRVLQYYRKRGRDRRMIFDVDTVSKIEGS
LLELEPRIDSYEESLEFCLQKLPERSRRMLELRYTCAMSADEIASQLKMTVQSVYTRLSQ
IRVALRDCVRRQLRRTGGNAP
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagtttggcgttaaggtcccggaaggcgtcgcccatataagcagtgtcatggcg
gggcgagagcagcacgaatcggaccgacgctgcgacttcgccaccctgtgggcggagtcc
tacgataagctacggacctatgtccggatctttgtgcccgtcctccatgacgcggatgac
gtgctgcaagacacggcggtcgccatcgcaaaggacttcgacaaatacgaccccgagcgt
ccgttcctggaatgggcggttggcgtcgctcggaaccgggtcctccagtactaccggaag
cgcggacgcgaccggaggatgattttcgatgttgacactgtgtcgaagatcgaagggagc
ctgctggagctcgaaccacgaatcgacagctacgaagagtccctcgaattttgcctgcag
aagctcccggaacggtcacgccggatgctcgagttgcgatacacctgtgcgatgagcgct
gacgagatcgcaagtcagctaaagatgacggtgcagtcggtctacacccggctgtcccag
atccgtgtcgccctgcgggactgcgtccgcaggcaattgcgtaggacaggagggaacgcc
ccgtga
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