Botrimarina mediterranea: Spa11_25860
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Entry
Spa11_25860 CDS
T09862
Symbol
ybbD
Name
(GenBank) putative lipoprotein YbbD precursor
KO
K05349
beta-glucosidase [EC:
3.2.1.21
]
Organism
bmei
Botrimarina mediterranea
Pathway
bmei00460
Cyanoamino acid metabolism
bmei00500
Starch and sucrose metabolism
bmei00946
Degradation of flavonoids
bmei00999
Biosynthesis of various plant secondary metabolites
bmei01100
Metabolic pathways
bmei01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Spa11_25860 (ybbD)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Spa11_25860 (ybbD)
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
Spa11_25860 (ybbD)
00999 Biosynthesis of various plant secondary metabolites
Spa11_25860 (ybbD)
Enzymes [BR:
bmei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.21 beta-glucosidase
Spa11_25860 (ybbD)
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Motif
Pfam:
Glyco_hydro_3
WsaF_C
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
QDV74383
UniProt:
A0A518K9C8
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All DBs
Position
complement(3254530..3256092)
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AA seq
520 aa
AA seq
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MTVSSTPKPTDEPTDLRERLAQLLMVRIGSNLPPILRVHEDEGRVVQLLGDCPVGGLLLF
NGSWPETRETLQRLQSQCRHRLLVASDIERGAGQQVAGLTLFPHQRAFVDLKDSDEAIGE
FCRTTASEAHAAGIDVTFGPVADVNSDPRNPIIATRAFGNDPQRAAELVAAYIRACEAEG
LMTTAKHFPGHGDTHQDSHDATPRVEASAEELRQRELVPFQAAIDAGVSLLMTAHVEYPA
LDPSGLPATLSRPILVDLLRGEMGFEGVVCSDSLLMAGVRDRFDTEGEMCLAALNAGVDL
LLDVADPVSVVSALVEAVEAGRLTIERINEAFDRVWRLKERAASRASIQLPTPESLAGGE
AAALRIAGAATRVVSASPGALPLDRSKSVTCLMLKPHHRPTDPPEQPLAAALREEFAAVR
YFETGPEIDPSLAADLLAGCPEGSPIVVAMIVKPAAWHAFGLTEVQDAVIRELMAARPVV
LVCLGVENALDGYPDAAARLVTHSDVPASQRALAAVLVTR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgagttcaacccccaagccaaccgacgagccgaccgatctgcgcgagcgcctc
gctcaattgctgatggtgcgcatcggctcgaacctgccgccgatcctccgtgttcatgag
gacgaagggcgggtggttcagctgctcggcgactgccccgttggtgggctgctgctcttt
aatggctcttggcccgaaacgcgcgaaacgctccagcgtttgcagtcgcagtgtcggcat
cgcctgctcgtcgccagcgacatcgaacgcggcgccgggcagcaggtggcggggctgacg
ctgtttccccatcaacgcgcgttcgtcgatctcaaagactcggacgaagcgatcggcgag
ttctgccgcacgacggcgagcgaagcccacgccgcgggcatcgacgtgacgttcggcccc
gtcgccgatgtgaacagcgacccgcggaacccgatcatcgcgacccgcgcgttcggcaac
gacccgcagcgcgcggcggagcttgtcgccgcttatatccgggcttgcgaagcggagggc
ctgatgaccaccgccaagcacttccccggccacggcgatacgcaccaagactcgcacgac
gccacgccgcgcgtcgaagcctcggccgaagagctgcgccagcgagaactcgtcccgttc
caagcggcgatcgacgcaggcgtctcgctcttgatgacggcccatgtcgagtaccccgcc
ctcgaccccagcggcctgcccgcgacgctctcgcgcccgatcctcgtcgatctgctgcgc
ggcgagatgggcttcgaaggggtcgtgtgcagcgacagcctgctgatggcgggcgtgcgc
gatcgcttcgacaccgagggcgagatgtgcctggcggcgctcaacgccggcgtcgacctg
ctgctcgacgtcgccgaccccgtgtcggtcgttagcgccctggtggaggccgtcgaagcg
gggcgtttgacgatcgaacggatcaacgaagccttcgaccgcgtctggcgattgaaagaa
cgcgcggcgtctcgcgcgtcgattcaactgccgacgcccgaaagcctcgccgggggtgaa
gccgcggcgctgcggatcgccggcgccgcgacgcgcgtcgtctcggcgtcgcccggcgcg
ctgccgctcgatcggtcgaagagcgtcacgtgcctgatgctcaaaccgcaccaccgcccc
accgacccgccggagcaaccgctggcggcggccctgcgggaggagttcgccgcggtccgt
tacttcgagacgggccctgagatcgatccctcgctcgccgccgacctcctcgccggatgt
cccgaaggttcgccgatcgtcgtggcgatgatcgtgaagcccgccgcgtggcacgccttt
gggctgaccgaagtgcaggacgcagtgatccgcgaactgatggcggcccggccggtggtg
ctcgtctgcctcggcgttgagaacgcgctagacggctaccccgacgcggcggctcggctg
gtgacgcacagcgatgtgccggcgagccagcgggcgctggcggcggtcctcgtcactcgc
tga
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