Botrimarina mediterranea: Spa11_28260
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Entry
Spa11_28260 CDS
T09862
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bmei
Botrimarina mediterranea
Pathway
bmei03420
Nucleotide excision repair
bmei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Spa11_28260 (pcrA_2)
03430 Mismatch repair
Spa11_28260 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmei03400
]
Spa11_28260 (pcrA_2)
Enzymes [BR:
bmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spa11_28260 (pcrA_2)
DNA repair and recombination proteins [BR:
bmei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spa11_28260 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
Spa11_28260 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDV74620
UniProt:
A0A518KA11
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All DBs
Position
3577175..3579466
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AA seq
763 aa
AA seq
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MTKLLEGLNPAQREAVEHVDGPLLILAGPGSGKTRVVTHRIAHLLSLGVPAWQILALTFT
NKAAAEMRLRVERLAPGEKVWVSTFHRFGAKMLRKYAERVGLDPNYTIYDAGDARQTLKR
VIESLQIPVMGYTPDRIAAAISKAKNRLIGPEEFKPRPGNPLSEIVAAVYPAYQQRLIAS
SAVDFDDLLLHIARLLHDDADLRANLDERFRYVMVDEYQDTNRAQYVLLRALSVDHPNLA
ATGDPDQSIYGWRGADLNNILEFENDYPSVKVVRLEQNYRSTPAILSVADTLIAQNKKRK
AKSLFTENPEGPPVRLVTYADGDDEARGVATAIRDAVRSGRRRWSDFAVFYRVNALSRAI
ERVFRQQQIPFQMVRGQEFYQRREIKDVLAYCQLMNNPKDDLAFERTVNSPARGIGAKTI
QRLGDYAYRHGISLLESARDAAQIDGVTKRTATLVAKFVTLMDTLDAYVGGPAEEAVSAV
LEHSGYRKHLQGSDSEEDLNRLANIEELLTDARQFDEAMEEEEGAEANLEAYLERTWLVN
ETDGWDDDNDKVTLMTLHAAKGLEFPVVFLLAVEDGILPHERSANDPTQLEEERRLAFVG
ITRAEQELQLSHALRRDYRGQRRIAIPSSFLMELPTDTMDLAQLAATDDLGLAPDDLIGD
WGDAPDEEVYRHEPIAKAPEPVTVEAPAIKTAATLLSAGGMGAMRVSPDAFKIGMEVEHP
ELGVGTVLTLSGSGKGRRAAVIFPDHGEKRFVLAFSPLRPLGK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaactccttgaaggcctcaatcccgcccaacgtgaagcggtcgagcatgtcgat
ggcccgctgctgatcctcgccgggccgggttcgggcaagacccgcgtcgtcacgcaccgc
atcgcccacctgttgtcgctcggcgtgccggcgtggcagatcctcgcgctgacgttcacc
aacaaggccgccgccgagatgcggctgcgcgtcgaacggctcgctcccggtgagaaggtc
tgggtgagcacgttccaccgcttcggcgcgaagatgctgcggaagtacgccgagcgcgtc
ggcctcgaccccaactacacgatctacgacgcgggcgacgcgcgccagacgctgaagcgg
gtgatcgagtcgctgcagatccccgtcatgggctacacgcccgaccggatcgccgccgcg
atcagcaaggcgaagaaccgcctgatcggccccgaggagttcaagccgcggccgggcaac
ccgctgtccgaaatcgtcgcggcggtttaccccgcatatcagcagcggctgatcgcgtcg
tcggcggtggacttcgatgaccttttgctgcacatcgcgcggctgctgcacgacgacgcc
gacctgcgcgcgaatctcgacgagcgcttccgctacgtcatggtggacgagtaccaggac
accaaccgcgcacagtatgtgctgctccgcgcgctgtcggtcgatcacccgaaccttgcc
gcgacgggcgaccccgaccagtcgatctatggctggcgcggcgcggacctcaacaacatc
ctcgagttcgagaacgactatccgagcgtcaaggtcgtgcggctcgagcagaactaccgc
agcacgccggcgatcttgtcggtcgccgacacgctgatcgctcagaacaagaaacgcaaa
gccaagtcgctgttcaccgagaatcccgaaggcccgcccgtgcggctcgtcacttacgcg
gatggtgacgacgaagcccgtggcgtcgccacggcgatccgcgacgcggtccgcagcggc
cgccggcgctggagtgactttgccgtcttctatcgggtaaacgcgctgtcgcgggcgatc
gaacgcgtcttccgccagcagcagatccccttccagatggtgcgcgggcaggagttctat
cagcggcgtgagatcaaggacgtgctggcctactgtcagctgatgaacaacccgaaggac
gacctcgccttcgagcggaccgtcaactcgcccgcgcgcggcatcggggcgaagacgatc
cagcgtctcggcgattacgcgtaccgtcacggcatctccctgctcgaatccgcgcgcgac
gcggcgcagatcgatggcgtcacgaagcgcaccgcaacgctcgtcgccaagttcgtcacg
ctgatggatacgctcgacgcgtacgtcggcggccccgccgaagaagccgtcagcgccgtg
ctcgagcactccggctaccgcaagcacttgcaagggagcgatagcgaagaggacctcaac
cggctggcgaacatcgaagagctgctcaccgacgcgcggcagttcgacgaggccatggaa
gaggaagaaggggccgaggcgaatcttgaagcctatctcgaacgcacgtggctcgtgaac
gagaccgacggctgggacgacgacaacgacaaggtgacgctgatgacgctccacgccgcg
aagggcttggagttcccggtcgtgttcttgcttgcggtcgaggacggcatcctgccgcac
gagcgttcggcgaacgatccgacgcagctcgaagaggaacgccgcttggcgttcgtgggc
atcacccgcgccgagcaagagctacagctcagccacgccctccggcgggactaccgcggc
cagcgccgcatcgcgatccccagcagcttcttgatggagttgccgaccgacacgatggac
ctcgcgcagcttgccgcaacggacgacctcggcctggcgccggacgatctgatcggcgat
tggggcgacgcgccggacgaagaggtctatcgccacgaaccgattgccaaagcgcctgag
ccggtcacggtcgaagcgccggccatcaagacggcggcgacgctgctctctgcgggcggg
atgggggcgatgcgcgtttcgcccgacgcgttcaagatcgggatggaggtcgagcacccc
gagctcggcgtcggaacggtgctcactctcagcggttcgggcaagggccgccgcgccgcg
gtgatcttccccgaccacggcgagaagcgattcgtcctcgccttcagcccgttgcggccg
ctcggcaagtag
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