Botrimarina mediterranea: Spa11_29500
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Entry
Spa11_29500 CDS
T09862
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bmei
Botrimarina mediterranea
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmei03016
]
Spa11_29500 (truA)
Enzymes [BR:
bmei01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Spa11_29500 (truA)
Transfer RNA biogenesis [BR:
bmei03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Spa11_29500 (truA)
Prokaryotic type
Spa11_29500 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
SPAN
Motif
Other DBs
NCBI-ProteinID:
QDV74742
UniProt:
A0A518KAD0
LinkDB
All DBs
Position
complement(3742745..3743542)
Genome browser
AA seq
265 aa
AA seq
DB search
MGDNGVANEGSQARPTHWLKLTVAYDGAAYAGWQWQPSEPTVQGVLQDAWRSITHEEPCF
TASGRTDAGVHAEGQVVGVETTSTIEPRRLLRGLNALLPDDVVIRAVEPAPVGFHATHDA
LRKTYRYQVLSGPVPPLFDRKHVWHWRAGQLDTERMGQGGAYLVGRHDFASLESTGSERS
STVRTITDLTVTSRPADGGERIDITVTGDGFLYNMVRTIAGTLVEVGRGAKPPEWVAEVL
ASRDRGRAGQTAPPQGLFLVRVEYA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgacaacggcgtagctaacgaaggttcgcaggctaggccgacacactggctcaag
ctcaccgtcgcctacgacggcgcggcgtacgccggttggcagtggcagccgagtgagccg
acggtgcagggcgtgctgcaagacgcttggcgcagcatcacgcacgaagagccttgcttt
accgccagcggtcgcaccgatgcgggcgtgcatgccgaggggcaggtcgttggcgttgag
acgacatcgacgatcgagccgcggcgtttgctgcgggggctgaacgcgctgctgcccgac
gacgtggtcattcgggccgtcgagccggcgccggtgggctttcacgccacgcacgacgcg
ttgcggaagacgtaccgctaccaggtcctgagcggccccgtgccgccgctgttcgaccgt
aagcacgtctggcactggcgcgcggggcagctcgacaccgagcggatggggcaggggggg
gcgtacctcgtcggtcgccacgacttcgcgtcgctcgaatcgacgggctcggaacgctcg
agcaccgtccgcacgatcaccgacctcaccgtcacgtcgcgccccgcggatggcggcgag
cggatcgacatcaccgtcaccggcgacggcttcctctacaacatggtccgcacgatcgcc
ggcacgctggtggaggtcggccgcggcgcgaagccgccggagtgggtcgccgaagtcctc
gccagccgcgaccggggcagggcgggacagaccgcgcccccgcaggggctttttttggtg
agggtggagtacgcctaa
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