Botrimarina mediterranea: Spa11_30380
Help
Entry
Spa11_30380 CDS
T09862
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bmei
Botrimarina mediterranea
Pathway
bmei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Spa11_30380 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmei03400
]
Spa11_30380 (xseA)
Enzymes [BR:
bmei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Spa11_30380 (xseA)
DNA repair and recombination proteins [BR:
bmei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Spa11_30380 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QDV74829
UniProt:
A0A518KAL1
LinkDB
All DBs
Position
3853783..3855006
Genome browser
AA seq
407 aa
AA seq
DB search
MSRAAIVSEPLTVAALTAQLKDTLESAFPSVWVAGEVSNFSRPSSGHCYFTLKDNTAQIR
AVMWKGAASRLRFDLGDGLDLVCHGSIDLYAPRGSYQLVIKEAQPRGVGALELQLQRLRE
KLAAEGLFDRANKRPLPAFPRRIAFVTSPTGAAIRDFLQVLSRRWRGVDVLVIPARVQGE
GAAAEIVAGIRAANRLRPMLDVLVVGRGGGSLEDLWCFNEEPVVRAIAASKVPVISAVGH
EIDVTLADLAADVRALTPSEAAERVAPSADEISDRLRSLSGRLHGGMRRRVLMSRDRVER
AGRSRPFARPHAMLQDAMRQLDELDAAAVRSIRRRIERGGARMATIAGKLESLSPLGVLE
RGYSLTTDARGKLVRAMDDVSIGDRLTTRLLRGEVISMVESVNDTAN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcgagctgccatcgtttccgaaccgctcaccgtcgccgcgcttacggcgcagctc
aaggacacgctcgaatcggctttccccagcgtgtgggtcgccggcgaggtgtcgaacttc
tcgcgtccctcgtcgggccactgctacttcacgctgaaggataacacggcccaaatccgc
gccgtgatgtggaagggcgccgcgtcgcggctgcggttcgacctcggcgacgggctcgat
ctggtctgtcacggatcgatcgacctctacgccccgcgcggcagctaccaactcgtcatc
aaagaggcccaaccccgtggcgtcggcgcgctggagctgcaactccagaggctgcgcgaa
aagctcgccgccgaagggctcttcgatcgcgccaacaagcgaccgctgccggcgttccca
cggcggatcgccttcgtcaccagccccaccggcgccgcgatccgcgacttcttgcaggtg
ctcagccgccgctggcgcggggtggacgtgctcgtgatccccgcgcgggtgcagggcgag
ggcgcggccgccgagatcgtcgccggcatccgcgccgccaatcgcctccgcccgatgctc
gacgtgcttgtcgtcggtcgcggcggcggcagcctcgaagacctctggtgcttcaacgaa
gagcccgtcgtccgcgcgatcgccgcctcgaaggtcccggtgatctcggccgtaggccac
gagattgacgtcacgctcgccgacctcgccgccgacgtccgcgcgctgacgcccagcgaa
gccgccgaacgcgtcgccccctccgctgatgagattagcgaccgactccgctcactcagc
ggcaggcttcacggcggcatgcggcgccgggtgctcatgtcgcgcgaccgcgtcgaacgc
gcgggccgcagccggcccttcgcaagaccgcacgccatgctgcaagacgcgatgcgccag
ctggacgaactcgacgccgccgcggtccgttcgatccggcggcggatcgaacgcggcggc
gcacggatggcgacgatcgccggcaagctcgaatcgctcagcccgctcggcgtcctcgaa
cgtggctactcgctgacgaccgatgcgcgcggtaaactcgtgcgcgcgatggatgacgtg
tcgatcggcgatcgcttgacgacacgcctcttacgcggcgaggtcatcagcatggtcgag
agcgtcaatgacaccgcgaattag
DBGET
integrated database retrieval system
