Botrimarina mediterranea: Spa11_30820
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Entry
Spa11_30820 CDS
T09862
Symbol
vsr
Name
(GenBank) Very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
bmei
Botrimarina mediterranea
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmei03400
]
Spa11_30820 (vsr)
DNA repair and recombination proteins [BR:
bmei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Spa11_30820 (vsr)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
QDV74873
UniProt:
A0A518KAP9
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Position
complement(3908619..3909086)
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AA seq
155 aa
AA seq
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MPTARIAKPSAERSRTMRAVKSRDTKPELLVAALLDELGVAYRREVAALPGKPDFVITGR
GRVVEKRGRQPLALFVHGCWWHAHDCPRGARTPKTNRAYWTAKITRNRRRDRRVTRELRE
LGYSVWTIWECRLKSRRLPPRLTARLKDYVVSRRR
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcccacagcgcgcatcgctaaaccgtccgccgagcgcagccgtacgatgcgggcggtg
aagagccgcgacacgaagcccgagttgctcgtcgcagcgctgctcgatgagttgggcgtc
gcttaccgtcgcgaagtcgctgcgctccccggcaagcccgactttgtgatcacagggcgg
ggccgggtcgtcgagaaacgcggccgccaaccgctggcgctgttcgtgcacggctgctgg
tggcacgcccacgactgtccgcgcggcgcccgaacgcccaagacgaaccgcgcctactgg
accgccaagatcacccgcaaccgccgccgcgaccgccgcgtcacccgtgaactgcgcgag
ctgggctactccgtctggaccatctgggaatgccgcctcaaatcacgccgccttcccccc
aggctcaccgctcgcttaaaagactacgtcgtgagccgtcggcgctag
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