KEGG   Botrimarina mediterranea: Spa11_32820
Entry
Spa11_32820       CDS       T09862                                 
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
bmei  Botrimarina mediterranea
Pathway
bmei03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bmei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Spa11_32820 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmei03400]
    Spa11_32820 (ruvB)
Enzymes [BR:bmei01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Spa11_32820 (ruvB)
DNA repair and recombination proteins [BR:bmei03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Spa11_32820 (ruvB)
    RecFOR pathway proteins
     Spa11_32820 (ruvB)
SSDB
Motif
Pfam: RuvB_N RuvB_C AAA_lid_4 AAA AAA_5 Mg_chelatase AAA_16 Sigma54_activat AAA_22 Sigma54_activ_2 AAA_14 AAA_3 TIP49 nSTAND3 TsaE AAA_24 AAA_2
Other DBs
NCBI-ProteinID: QDV75073
UniProt: A0A518KBB0
LinkDB
Position
4143350..4144435
AA seq 361 aa
MPRETILTAADSDAAADDRVEPTRLAAEAPRTDLATVDDVALRPKYLRDIIGQRAVCERI
QIAVDAAAGRKEPLGHVLLDGPPGLGKTTFATCIPRELDVSLQIASGAALSAPKDLLPYL
TNAEEGSVLFIDEIHRLPKAVEEFMYPAMEDFRIDITLGEGMNARTLNMKLRPMTIIGAT
TRSGMLSAPLRDRFPVREHLDFYSIAELTRIVVINAKKLGLPIDDDAAEKIATASRGTPR
IANNRLRWVRDYAQSRAAGEATLPVTDDALGMLGVDQAGLDPQDRKYLSTILRVFHGGPA
GVEAIAHTMNLPVDTLTDEVEPFLLRSELVIRTPRGRKLTTKAYDHLGVEAPSEEDAPRL
F
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgccccgcgaaaccatcctcaccgccgccgacagtgacgccgctgccgatgaccgcgtc
gagccgacgcgactcgctgccgaagcgcctcgcaccgacctcgccacggttgacgatgtc
gccctgcggcccaagtacctgcgcgacatcatcgggcagcgcgcggtgtgcgagcgcatc
cagatcgccgtggacgccgctgcgggccgcaaggagccgctcgggcacgtgctgctcgat
gggccgccggggctcggcaagacgaccttcgccacctgcatcccgcgcgagctcgacgtc
agccttcagatcgccagcggcgccgccctctccgcgccgaaggacctgctcccctacctc
accaacgccgaggagggctcggtcctcttcatcgatgaaatccatcggctccccaaagcg
gtcgaggagttcatgtacccggcgatggaggactttcggatcgacatcacgctcggcgaa
gggatgaatgcccgcacgctgaacatgaagctgcggccgatgacgatcatcggcgccacc
acgcgcagcggcatgctgtcggccccgcttcgcgaccgcttcccagtgcgtgagcacctc
gacttttactcgatcgccgagttgacgcgcatcgtcgtcatcaacgccaagaagctaggc
ctgccgatcgatgacgacgcggccgagaagatcgccaccgctagccgcggcacgccgcgc
atcgcgaacaaccgcctgcgttgggtccgcgactacgcccagagccgcgccgccggcgag
gcgacgctccccgtcaccgacgacgcgctaggaatgctcggcgtcgaccaagcgggcctc
gacccgcaagaccgcaagtacctctcgacaatcctgcgcgtcttccacggcggcccagcg
ggcgtcgaagccatcgcccacacgatgaacctgcccgtcgatacgctgaccgacgaagtc
gagccgttcctcttgcgcagcgagctcgtgatccggacaccaagaggcagaaagctaaca
acgaaggcttacgaccacctcggcgtcgaagcgccaagcgaagaagacgccccgcgcctc
ttctga

DBGET integrated database retrieval system