Botrimarina mediterranea: Spa11_32960
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Entry
Spa11_32960 CDS
T09862
Name
(GenBank) Autotransporter-associated beta strand repeat protein
Organism
bmei
Botrimarina mediterranea
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Paralog
GFIT
Motif
Pfam:
PATR
PEP_exosort_dom
BamI_lipocalin
Motif
Other DBs
NCBI-ProteinID:
QDV75086
UniProt:
A0A518KBA9
LinkDB
All DBs
Position
complement(4170944..4175425)
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AA seq
1493 aa
AA seq
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MKATSAFLLCLVLCATAAQAVIIVSGTDSGIYDSSGGAGSIDYTLQGSGNALVFGTYIDN
TYTPSGIQFGGATADGFVQDGRTSLFYFYDPVDMGSFSFNVSAGSANSAYFVYELSNVDT
SFAPDLGTGNSITTTTDNRFITNFIGVNNADGSALTSTGIQSLFGVGNANGAIGGGAVGA
GIADELATGVAGLKSLTWDGFGGGFSQGEVSAAFVGLAGGPVSWAIDGGGDWSLNSNWNG
GAPSSGGEALLGNILSTPNSPATISLDAPGINLSKLTISNPNRYVVTGPQTLTLSGDAEI
SVGGGTHEIAATITGSSGLLKSGGDNLILSGVNTYTGGTTIQGGSLQLANSGAVPGDVTM
AAAGELRFIEGFNGAFAGNITGSGAVVLDNSMTTETVTFNSAKSISGAVNINGGTLAVSN
SGALGTADGTAATWTRVSGDELGGVEDTGKLALTGGVNIASEFLVLGPRANAAIDAVHLT
SSGANTWGGNIKGEATGSQYNIESTSGTLTLSGTLSAPEGDGGAVAYVFSGAGNTNLTGR
ITDAETNASGDTFVGAPNAEDNVSVIKRGSGTLTIGTATTLQADYWQAGTVVEGGTLVVL
SNGANGGELWGPVEVQSGAVLDVDNFSSYSTQVDQLISGGGTIQAQTLALFDDAQVSPGD
GGVGTLTVNGNVVMNAGGGGGGTLQFELGDTTAIGDSDLIDVNGNVTTAGGAPSMTVSVV
AAEGSLAAGQYKLISHNGAAINVSGLTPAFLDSLGNALTTRQSLAISSASGAVNLDVTGT
AGSLTWTGANGTAWDKNTTQNWVDGGAEVFYDLDQVTFDDSAGANSTVDISGEDVYPSVV
TFNSSTGNTYTVTGTNGFGGQTPLNLTGDVTVSLGNTNTHEGDISLASGTTLEINGGAHT
FSGEISGAGSVVFQTGATLNGANTFTGEVTINGGTVFPNSATAFGTTDAGTTLNGGAIWY
NFQNLAVAEPMTLNGGSVIVAGNDASAVSFTGPVSVGAGGGTFLVNGGLGGDALAITNNV
TGSESGVVTVNVGPNSVATLTANVSNNGALSKVGTGILALAASAAVSSPVIEVNGGTLDV
TAKPSLVLGDGQMLTGNLSTVSGNVTAGSGSTIRVGGDGLPLSDAVYVDATWGAAESNTT
LVGGGTLTPLNNVFGDQPEWNARTPFGNGGSVLQGQTSQPNPNSAPVLVTTVDGLQSGEE
YEVWVNFWNDGSGWRVLAGDSESNLSLYDPANSVAASTLTYPTLVLTTEGNRTMLAGSLG
TFTANASGEIQVYLDESSETGGGNRAWYDGLSVSVQEIIGATLTVTGDVTLQADSAVALD
LGTPENSDLLSISGNLAAAGILDLSLDSQAPAPAEGDVFNLLDFTAASGVFDSIYVPGLG
ADLTWDDANLLTTGELSVVSFEGLLGDFNDDGVVNAADYTVWRDNVGTSFDLNGNGNELA
DSAGLVDAADYQLWARNYGAQAASSLASVPEPSALMLALTAGLLAARRQRIEN
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgacatcggcttttctgctttgcctggtcttgtgcgcgacggctgcacaggcc
gtcatcatcgtgtccggaacggacagcggcatctatgactcgtccggcggggccgggagc
atcgactacacgctccaagggtctggcaacgcgctcgtcttcggcacctacatcgacaac
acctacacgccctccggcatccagttcggtggggccactgccgacggcttcgttcaggac
ggccggacgtcgctcttctacttctacgaccccgtcgatatggggtcgttctccttcaat
gtgtcggccggcagcgctaactcggcatactttgtttacgagttgagcaacgtcgatacg
tccttcgcgcccgacctcgggacgggaaactcgatcactacaacgaccgataatcgcttc
atcaccaactttatcggcgtcaacaacgccgatggctcggcgctcacttccaccggcatc
cagtccctgttcggcgtggggaacgccaatggggcgatcggtggcggagcggtcggcgcc
ggcatcgccgacgaactcgccacgggcgtcgccggtttgaagtccctaacgtgggacggc
ttcggcggcggcttctcgcagggagaggtctccgcggcgttcgtcgggttggccggcggc
ccggtctcgtgggcgatcgacggcggcggcgactggagcctcaacagcaactggaacggc
ggcgcgccgagcagcggcggcgaggctctgttgggcaacatcctctccacgccgaactct
cccgcaacgatcagtctcgacgctcccggcatcaacctcagcaagctgacgatcagcaac
cccaaccgttacgtcgtcaccggaccccagacgctgacgctgagcggcgacgccgagatc
tcggtcggtggcggcacgcacgagatcgccgcgacgatcaccgggtcgtcgggcttattg
aagagcggcggcgacaacctgatcctctcgggcgtcaacacctacacgggcggcacgacc
atccagggtggttcgctgcaactcgccaacagcggcgccgtgccgggcgatgtcaccatg
gcagcggccggcgagctgcgcttcattgaaggcttcaacggcgcgttcgccgggaacatc
accggcagcggcgcggttgtgctcgacaactcgatgacgactgagaccgtcacgttcaac
tcggccaagtcgatctcgggcgcggtcaacatcaacggcggcacgctagccgtcagcaac
agcggcgcgttgggcacggcggacgggaccgcggcgacttggacacgggtgagtggcgac
gaactaggcggcgtcgaggacaccggcaagctcgccctgacgggcggcgtcaatattgct
agtgagttcctcgtcctcgggccgcgggcaaatgcggcgatcgacgcggttcacctgacg
agcagcggcgcgaacacctggggtggcaacatcaagggtgaggcgaccggctcgcagtac
aacatcgaatcgacttctggaacgctcacgcttagcggcaccctctctgctcccgagggg
gacggcggcgcggtggcctacgtcttctcgggcgccggcaacaccaacctgaccggccgg
atcaccgacgccgagaccaacgccagcggcgacaccttcgtcggcgccccgaacgccgaa
gacaacgttagcgtgataaagcgtgggtccggcacgctgacgatcggcacagccaccacg
ctccaagcggactactggcaggccgggacggtcgtcgaggggggcacgctggtggtcctc
tccaacggcgccaacggcggcgagctctggggacccgtcgaggtgcagagtggcgcggtc
cttgatgtcgataacttctcgagctactcaacgcaggtcgatcaactcatctcgggtggt
ggaacgattcaggcccagaccctggctctcttcgacgacgcccaggtcagccctggcgat
ggcggggtgggtacgctgaccgtgaacggcaacgtcgtgatgaacgcaggcggcggtggc
ggcggcacgctccagttcgaactgggcgacaccacggccatcggcgacagcgacctgatc
gacgtcaacggcaacgtcacgacggcgggcggcgcgcccagcatgacggtcagcgtcgtc
gcggccgagggcagtctcgccgcggggcagtacaagctgatctctcacaacggcgcggcg
atcaacgtcagcggcctcacgccggcgttcctggattccttgggcaacgcgctcacgacg
cgacagtcgctggcgatcagctcggctagcggcgcggtgaacctcgacgtcaccggcacg
gcggggagtctcacctggaccggcgccaacgggacggcgtgggacaagaacaccacgcag
aactgggtcgatggcggcgccgaagtcttctacgacctcgaccaggtcacgttcgacgat
tcggcgggcgccaacagcaccgtcgatatctcgggtgaggacgtctacccctcggtcgtc
acgttcaatagctcgaccggcaacacctacacggtgaccggcacgaacggcttcggcggt
cagacgcccctcaacctgacgggcgatgtgacggtctcgcttgggaatacgaacacgcac
gagggcgacatcagtcttgcctcgggcacgacccttgagatcaacggcggcgcccatacg
ttctcgggtgagatcagcggcgccgggtcggttgtcttccagacgggcgctactctgaac
ggggccaacacgttcaccggcgaggtgacgatcaacggcggcaccgtgttcccgaactcg
gcgaccgctttcgggaccaccgatgcggggacgaccctcaatggtggggctatctggtac
aacttccagaacctggcggtcgccgagccgatgacgctcaacggcggcagcgtgattgtc
gcgggcaacgacgcgtcggccgtgagtttcaccggtccggtgagcgtcggcgccggcggc
ggcacgttcctcgtcaacggtgggctcggcggcgacgccctcgctatcacgaacaacgtc
acgggttcggaatcgggggtcgtcaccgtcaacgtcggcccgaactcggtcgccacgctc
accgccaacgtttctaacaacggcgcgttgagcaaggtcggcaccggcatcctcgccctg
gccgcttcggcggctgtttcgtcgccggtgatcgaagtcaacggcggcacgctcgacgtc
accgcaaagccgtccctcgtgctcggcgatgggcagatgctgacgggcaacctgagcacc
gttagcggcaacgtcaccgctggcagcggttcgacaatccgggtcggcggcgacggcttg
ccgttgtcggacgccgtgtatgtcgacgccacctggggcgccgccgagagcaacaccacg
ctggtgggcggcggaaccctcacgccactcaacaatgtcttcggcgaccagcccgaatgg
aacgcccggaccccgttcggtaacggcggcagtgtactgcaaggccagacgtcgcagccg
aacccgaactccgcgcccgtgctcgtgacgacggttgacgggctgcagtccggcgaggag
tacgaggtctgggtcaacttctggaacgacggctccggctggcgggtgctcgccggtgat
tcggagagcaacctgtcgctctacgacccggccaacagcgtggccgcctcgacgctgact
tatccgaccctcgtgctcacgaccgaggggaaccgaacgatgctcgccggcagcctcggc
acgtttaccgcgaacgcctcgggtgagatccaggtgtacctcgacgagagcagtgagacc
ggcggcggcaatcgcgcctggtacgacggtctctcggtctcggtgcaagagatcatcggc
gcgactctgaccgttacgggcgacgtgaccctgcaagccgactcggcggtcgcgctggac
ctcggcactcccgagaactcggacctgctgagtatttctggcaacttggccgccgccggc
atcctcgacctctcgctcgactcgcaagcgccggctccggcggagggcgatgtgttcaac
ctcttggacttcactgccgctagcggcgtctttgactcgatctacgttccggggttgggc
gccgacctgacgtgggacgacgccaatctgctcaccaccggcgagctgagcgtcgtcagc
ttcgagggtttgctcggcgacttcaacgacgacggcgtcgtcaacgcggctgactacacc
gtgtggcgtgacaatgtcggcaccagcttcgacctcaacggcaacggcaatgagcttgcc
gatagcgcgggcttggtggacgccgccgactaccagctgtgggctcggaactacggcgcc
caagccgcgtcgtcgttggccagcgtgcccgaaccgtcggctctgatgttagcgctgacc
gcgggattgctcgcagcccggcggcagcgaattgagaactga
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