Botrimarina mediterranea: Spa11_32980
Help
Entry
Spa11_32980 CDS
T09862
Symbol
gcdB
Name
(GenBank) Glutaconyl-CoA decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
bmei
Botrimarina mediterranea
Pathway
bmei00362
Benzoate degradation
bmei00620
Pyruvate metabolism
bmei00650
Butanoate metabolism
bmei01100
Metabolic pathways
bmei01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Spa11_32980 (gcdB)
00650 Butanoate metabolism
Spa11_32980 (gcdB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Spa11_32980 (gcdB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bmei02000
]
Spa11_32980 (gcdB)
Enzymes [BR:
bmei01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
Spa11_32980 (gcdB)
Transporters [BR:
bmei02000
]
Other transporters
Primary active transporters [TC:
3
]
Spa11_32980 (gcdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
QDV75088
UniProt:
A0A518KBD3
LinkDB
All DBs
Position
complement(4178353..4179480)
Genome browser
AA seq
375 aa
AA seq
DB search
MDILLEFLKTTGFYQMSPGNLGMLLVGLVFIALAILKDYEPLLLCPIGFGILVGNIPCAD
NMALGVYDEGSVLHYLYFGVSQGVFPPLIFLGIGAMTDFSTMLSEPKLVLLGAAAQAGIF
LTLLGAMFIGFTPSEAGAIGIIGGADGPTAIFLSAKLAPHLLGAIAIAAYSYMALVPVIQ
PPVMRLLTTKSERLIRMRPPRQVSRHERILFPIAAFLICAMIAPGSLVLIGMLFFGNLLK
ESTVTERLANTARTAMIDIVTILLGFVVGASTDADQFLTKQSLLIFGLGALSFAIATASG
VLFAKFMNLFLHHKINPLIGAAGVSAVPDSARVVQVVGHESDPNNHLLMHAMAPNVAGVI
GSAIAAGVLWSVLTK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctgctcgagttcttgaagaccaccggcttctatcagatgtcgccgggcaat
ctggggatgctcctcgttggattggtcttcatcgcgttggcaatcctcaaggactacgag
cccttgctgctttgcccgatcgggtttggcatccttgtcggcaatatcccgtgcgccgac
aacatggcgctcggcgtgtacgacgaggggagcgtgctgcactacctttacttcggagtc
agccaaggcgtctttccgccactcatcttcctgggcatcggggcgatgaccgatttctcg
acgatgctctcggagccgaagcttgtcctgttgggggcggcggcgcaagcaggcatcttc
ttgacgttgctcggcgccatgttcatcggcttcacgccgagcgaggcgggggcaatcggc
atcatcgggggcgccgatgggccgaccgctatcttcctatcggcgaagttggccccgcac
ctcctcggggcgatcgccattgccgcctactcctacatggcgctggtgccggtgattcaa
ccgccggtcatgcggctgctaaccacgaagagtgagagacttatccggatgcgaccgccg
cgtcaggtatcgcggcacgagcggatcctcttcccgatcgccgcctttttaatatgcgcg
atgatcgcgccggggtcgcttgtgttgatcggcatgctgttcttcggcaacctgctgaaa
gagagcacggtgaccgaacggctcgctaatacggcccgcaccgcgatgatcgatattgtg
acgatattgctgggctttgtagtcggcgcgagcaccgacgcggaccagttcctcaccaaa
cagtcattgttgatcttcggtctcggcgcgctgtcgttcgccatcgcgaccgcgtccggc
gtgctcttcgcgaagttcatgaacctcttcctgcatcacaagatcaacccgttgatcggc
gcggcgggagtgtcggccgtgcccgattcggcgcgcgtcgtccaagtggtaggccacgag
tccgacccgaacaatcacctgctgatgcatgcgatggcgccgaacgtggcgggcgtcatc
gggtcagcgattgcggcgggcgtgctatggtccgtcctcaccaagtaa
DBGET
integrated database retrieval system
