Botrimarina mediterranea: Spa11_34800
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Entry
Spa11_34800 CDS
T09862
Symbol
yhaM_1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bmei
Botrimarina mediterranea
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmei03019
]
Spa11_34800 (yhaM_1)
Messenger RNA biogenesis [BR:
bmei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Spa11_34800 (yhaM_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QDV75266
UniProt:
A0A518KBU4
LinkDB
All DBs
Position
complement(4405638..4406618)
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AA seq
326 aa
AA seq
DB search
MADLASGEEGDFFALLAEKQTMLTKDGKPYYRVTFRDARRDCSFPIWSDAPLADVCRDQW
VVGEFYKVRALYRETNYGPQLDIRKIRPVEPADEADGFSPQMCQPSSRFDTQEMFADLVA
IAEEGIDEGPLRTLTVGLLEEHRELLLTWPAATRNHHAFAGGYLEHVRNVSRHAYYLAQR
YAELYPDMTPPLRVDVAVAGAILHDIGKLRELRVTPSGGEYTAAGNLIGHILQGRDMVRE
AAAELEEPLDEETLLRLEHVIVSHQRLPEWGSPKPPMTPEALIVHFADDCDAKYQMMLTI
LGDDPSEGPVTGRRNVLGQAVYRGGE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccttgccagtggcgaggagggggacttctttgcgctgttggcggagaagcag
acgatgctcaccaaggacggcaagccgtactatcgggtgacgttccgcgacgcgcggcgg
gattgcagcttcccgatttggagcgacgcgccgctggccgatgtgtgccgcgaccagtgg
gtagttggtgagttctacaaagttcgcgcgctgtaccgtgagacgaactacggcccgcag
ctcgacatccgcaagatccgccccgttgagccggcggacgaggccgacgggttttcgccg
cagatgtgccagccgtcgtctcggttcgacacgcaggagatgttcgccgacttggtcgcc
atcgccgaggaaggaatcgacgaggggccgctgcggacgctgaccgtcggactgcttgaa
gagcaccgcgagttgctgctgacatggcccgcggcgacgcggaaccatcacgcctttgcc
ggcggttacctagagcacgtgcggaacgtgtcccggcacgcttactatctggcgcagcgc
tacgccgagttgtaccccgacatgacgcctccgctgcgggtggatgtcgcggtggctggg
gcgatcctgcacgacatcggcaagctgcgtgagctgcgggtcacgccgtcgggcggcgag
tacacggcggccggcaacctgattggccacatcctgcaaggacgcgacatggtgcgggaa
gcggcggcggagctcgaagagccgctcgacgaggagaccttgctgcggctggaacacgtg
atcgtcagccaccagcgactgccggagtgggggagccccaagccgccgatgacgcccgag
gcgctgatcgtccactttgccgacgattgcgatgcgaagtaccagatgatgctgacaatc
ctgggcgacgatccgtcagaggggcccgttactgggcggcggaacgtgctagggcaggcg
gtctaccgcggtggggagtag
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