Botrimarina mediterranea: Spa11_38640
Help
Entry
Spa11_38640 CDS
T09862
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bmei
Botrimarina mediterranea
Pathway
bmei00300
Lysine biosynthesis
bmei00470
D-Amino acid metabolism
bmei01100
Metabolic pathways
bmei01110
Biosynthesis of secondary metabolites
bmei01120
Microbial metabolism in diverse environments
bmei01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Spa11_38640 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Spa11_38640 (lysA)
Enzymes [BR:
bmei01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Spa11_38640 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QDV75644
UniProt:
A0A518KCX7
LinkDB
All DBs
Position
4891647..4893170
Genome browser
AA seq
507 aa
AA seq
DB search
MRRAGDVSRRWEAGTSAEYKRMTPTTNVAGSLQTRTSCVTRGSHSPPRASTVDASTTAST
NTTPPSVSPILTHFAGVPIPQLAAEFGTPLYVYDAAMIRQRARDLAPFDVTRFAQKACSN
LSILRLMRDEGVLVDAVSAGEIARALAAGYAPSEKDHDDAAIAAGHHPAIVYTADVFDRA
AIDTVIEHDLPVNCGSPDMIDQYGERCQALGRRHGVTLRINPGFGHGHSQKTNTGGEGSK
HGVWHTEVADCVARAERWGLRVTGVHMHIGSGTDMSHLHKVGEALERIALEVGSSVLTIS
AGGGLSTPYRGDEPPIDVAGYYNTWNAVRERLASAFGHAVNLEIEPGRYLVAESGALLTE
VRAVKKQGTLNYVLVDAGFNNLARPAMYGAYHPVSMCPAGSGQDKEGGSSATTADCPPPT
ADFVIAGPLCESGDVFTQKDGGIVEARPLPQPTIGDYLVIGGAGAYGYTMASNYNSKPLC
AEVLIENGQPRLIRRAQTVDDLLAAEL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgagccggcgacgttagtcgtcggtgggaagcgggtaccagcgccgaatacaaa
cgaatgacaccgacgactaacgtcgccggctcgctacaaacgagaaccagctgcgtaacc
cggggctcacactccccaccccgcgcgtctaccgtagatgcctccacaaccgcgtccacc
aacacgaccccgcccagcgtgtccccgatcctcacccacttcgccggcgtccccatcccg
cagctcgccgccgagttcggcacgccgctctacgtctacgacgctgcgatgatccgccaa
cgggcgcgtgacctcgcgccgttcgacgtgacccgcttcgcgcagaaggcttgctcgaac
ctctcgatcctccgcctgatgcgcgacgagggcgtcctcgttgacgcggtgagcgccggt
gagatcgcccgcgcgctcgcggccggttacgcgccgtccgagaaggaccacgacgacgcg
gcgatcgccgccggccatcaccccgcgatcgtctacacggccgacgtgttcgaccgcgcc
gcgatcgataccgtcatcgagcacgacctgccggtcaactgcggctcgcccgacatgatc
gaccagtacggcgagcgttgccaagcgctcggccggcgccacggcgtgacgctacgcatc
aacccgggcttcggtcacggccatagccagaagaccaacacgggcggcgagggctcgaag
cacggcgtctggcacaccgaggtggccgactgcgtcgcccgcgccgagcgctggggccta
cgcgtcactggcgtgcacatgcacatcggctcggggaccgacatgtcgcacctccacaag
gtcggcgaagcgctcgagcgcatcgcgctggaggtcggctccagcgtgctcaccatctcc
gccggcggcggcctcagcaccccctaccgcggcgacgaaccgccgatcgatgtcgctggc
tactacaacacctggaacgccgtccgcgaaagactagccagtgcgttcggccacgcggtg
aacctcgagatcgaacccggccgctacctcgtcgccgagtcgggcgcccttctcaccgaa
gtccgcgccgtcaagaagcaaggcacgctcaactacgtcctcgtcgacgccggcttcaac
aacctcgcgcgaccggcgatgtacggcgcgtaccatcctgtgtcgatgtgcccggcgggg
agcgggcaggacaaagaaggtggctcgtcagcaactactgccgactgcccaccgccgact
gccgacttcgtcatcgccggccccctctgcgagtccggcgacgtcttcacgcaaaaagac
ggcggcatcgtcgaggcgcgtccgctgcctcagcccacgatcggcgactacctcgtcatc
ggcggagccggcgcctacggctacacgatggcgagcaactacaacagcaagccgctgtgc
gccgaggtgctcatcgagaacggccagccaaggctgatccgtcgggcgcagacggtggac
gatctcttggcggcggagctttag
DBGET
integrated database retrieval system