Botrimarina mediterranea: Spa11_41840
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Entry
Spa11_41840 CDS
T09862
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bmei
Botrimarina mediterranea
Pathway
bmei00260
Glycine, serine and threonine metabolism
bmei00460
Cyanoamino acid metabolism
bmei00630
Glyoxylate and dicarboxylate metabolism
bmei00670
One carbon pool by folate
bmei00680
Methane metabolism
bmei01100
Metabolic pathways
bmei01110
Biosynthesis of secondary metabolites
bmei01120
Microbial metabolism in diverse environments
bmei01200
Carbon metabolism
bmei01230
Biosynthesis of amino acids
bmei01240
Biosynthesis of cofactors
bmei04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Spa11_41840 (glyA)
09102 Energy metabolism
00680 Methane metabolism
Spa11_41840 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Spa11_41840 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Spa11_41840 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Spa11_41840 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Spa11_41840 (glyA)
Enzymes [BR:
bmei01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Spa11_41840 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
SelA
Motif
Other DBs
NCBI-ProteinID:
QDV75961
UniProt:
A0A518KDU7
LinkDB
All DBs
Position
complement(5299983..5301254)
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AA seq
423 aa
AA seq
DB search
MNFIQENDPAVWNAISAEIERQQDGLEMIASENYTSPAIQQAVGSVLTNKYAEGYPGRRY
YGGCEHVDVVEDLARDRAKELFGAEFANVQPHSGSQANAAVYLALLEPGDTLLGLDLAHG
GHLTHGMKLNMSGLLYNCVSYGVRKDDCRIDFDQVAKQAREHKPKLIIAGASAYPREIPH
AKFREIADEVGAKLMVDMAHYAGLVAAKLHDDPVEVADVVTTTTHKTLRGPRSGLILAKQ
EYAKVLNSRVFPGVQGGPLMHVVAGKAICFGEALKPEYRTYIQQVKDNAVALAETLAAGG
LNLVSGGTENHLMLVDVTPLGIGGKTAETALGACGITVNMNMIPFDERKPMDPSGIRVGT
PALTTRGMGVEEMRTIGGWMLESLKNAEDAAAHARIREQVREFCTGFPVPAAELNAELDA
VAG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcattcaagagaacgacccggccgtctggaacgccatctccgccgagatcgag
cgccagcaagacgggctggagatgatcgccagcgagaattacaccagccccgccatccag
caggccgtgggcagcgtgctgaccaacaagtacgccgagggctatccaggccggcgctac
tacggcggctgcgagcacgtcgacgtggtcgaggacctcgcccgtgaccgtgcaaaggag
ctctttggcgccgagttcgccaacgtccagccgcacagcggctcgcaggcgaacgccgcg
gtctatctcgcgctgctcgagccgggcgacacgctcctgggcctcgacctcgcccacggt
gggcacctcacgcacggcatgaagctcaacatgtcgggcctgctctacaactgcgtctcg
tacggcgtgcggaaagacgactgccggatcgacttcgaccaagtcgccaagcaggcgcgc
gagcataagccgaagctgatcatcgccggcgcgagcgcctacccgcgcgagatcccgcac
gccaagttccgtgagatcgccgatgaggtgggcgcgaagctgatggttgacatggcccac
tacgcgggcctcgtcgccgcgaagctgcacgacgatccggtggaggtcgccgacgtcgtc
acaaccaccacgcacaagacgctccgcggcccacgctcgggactcatcttggcgaaacag
gagtacgccaaggtgctcaacagccgcgtcttcccgggcgtgcagggcggcccgctgatg
cacgtcgtcgccggcaaggcgatctgcttcggcgaagccctcaagcccgagtaccgcact
tacatccagcaggtgaaggacaacgccgtcgcgctagccgaaacgctcgccgccggcgga
ctgaacctcgtgtcaggcggcaccgagaaccacttgatgctggtcgacgtcaccccgctg
ggcatcggcggcaagacggccgagaccgccctcggcgcctgcggcattacggtgaacatg
aacatgatcccgttcgacgagcgcaagccgatggacccctccggcatccgcgtcggcacc
ccagccctgacgacgcgcggcatgggcgtcgaagagatgcgcacgatcggcggttggatg
ctcgaatcgctaaagaacgccgaagacgcagccgcccacgcccgcatacgcgaacaagtc
cgcgagttctgcacgggcttcccggtcccggcggcggagctgaacgccgagctcgatgcg
gtggccggatag
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