Botrimarina mediterranea: Spa11_42540
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Entry
Spa11_42540 CDS
T09862
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bmei
Botrimarina mediterranea
Pathway
bmei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Spa11_42540 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmei03400
]
Spa11_42540 (mutM)
Enzymes [BR:
bmei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Spa11_42540 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Spa11_42540 (mutM)
DNA repair and recombination proteins [BR:
bmei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Spa11_42540 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_IS1595
Zn_ribbon_6
DUF7573
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QDV76030
UniProt:
A0A518KE16
LinkDB
All DBs
Position
complement(5390149..5391036)
Genome browser
AA seq
295 aa
AA seq
DB search
MNLPLAILGAPGVLAVPMPELPEVETMRRGVAEAAGATVTSFERLPCPRKPIGVAPRVDH
LRRRVVGRGVAAVERLGKRVVLRLETGDRLVMEPRMTGLVGAGDSPDPFYLRVELGLEGV
GLERVWFWDRRGLGKVRLYSAAEFAVELGPEKLGPDGLVVSSDDLHRRLAGSRRAVKVAL
LDQRAVAGIGNIYAAEILHVAEVHPATRCDRLTQATWRRIAEATRAVLEEAVRYEGSSLG
DGTYRNKLNEDGGYQLHHRVYGRAGERCPRCGGTIQRIVQAQRSTFFCASCQRRR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgaacctccccctggcgatccttggcgctcctggcgtcttggcggtacccatgcccgag
ctacccgaagttgagaccatgcggcggggcgtcgccgaggcggcgggcgctacggtcacc
tcgttcgagcggttgccttgcccgcggaagccgatcggggtggcgccgcgcgtggaccat
ttgcggcggcgtgtcgttggacgtggggtggcggcggttgagcggctgggcaagcgggtg
gtcctgcggctggagacgggcgaccggctggtgatggagccgcggatgacggggctggtg
ggcgccggtgattcgcccgatccgttttacctgcgggttgagctgggacttgagggcgtt
ggtctggaaagggtttggttctgggaccggcgggggctggggaaggttcggctttattcg
gcggcggagtttgccgttgagttggggccggagaaactggggccggatgggctggtggtt
tcctccgacgacttgcatcgccggctcgccggcagccgtcgggccgtgaaagtggcgctg
ctggatcagcgcgcggtcgcggggatcgggaacatctacgcagcggagattctgcacgtg
gccgaggtgcaccccgcgacgcgatgcgaccggctcacgcaagcgacgtggcggcgcatc
gccgaggcgacgcgggcggtgctcgaagaagcggtccgctacgagggctcgtcgctcggc
gatggcacgtatcgcaacaagctcaacgaggacggcggctaccaactccaccaccgcgtc
tacggccgcgcgggcgagcgatgtccgcgctgcggcgggaccatccagcggatcgtccag
gcgcaacgctcgacgttcttctgcgcgagttgtcagcggcgaaggtga
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