KEGG   Botrimarina mediterranea: Spa11_45660
Entry
Spa11_45660       CDS       T09862                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
bmei  Botrimarina mediterranea
Pathway
bmei00740  Riboflavin metabolism
bmei01100  Metabolic pathways
bmei01110  Biosynthesis of secondary metabolites
bmei01240  Biosynthesis of cofactors
bmei02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bmei00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Spa11_45660 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Spa11_45660 (ribD)
Enzymes [BR:bmei01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Spa11_45660 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Spa11_45660 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: QDV76336
UniProt: A0A518KEW6
LinkDB
Position
5753114..5754226
AA seq 370 aa
MSPEQVDDVAAMRRALQLAARGEGLVEPNPMVGCVVVLDGAIVGEGFHQRFGGPHAEVNA
LKAAGDRAKGAKLFVTLEPCCHTGKTPPCVEAVLAAGVKRVVIAMRDPFPKVDGGGIRAL
EAAGVECVVGVLEDDARRLVAPYLKLLETGRPWVIAKWAMTLDGKIATSTLDSQWISNEA
SRARVHRLRGRVDAVIVGARTLVADDPLLTARPTGPRTPLRIVIAGDKPLPIDRKLWNTP
DDGAVLVAVGEGYPAADAQQLRDRGVEVLTATPPQLLDELGRRRLTNVLVEGGGKLLGQF
FDQQLIDESWAFVAPKLIGGTGPGPIGGEGVAFMRDALTFTEVTHESIDGDLLIRGRTKL
EPRMDANHRE
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgagccctgagcaagtagacgatgtcgccgcaatgcgccgggctttgcagcttgccgcg
cgcggggagggcttagttgagccgaacccgatggtcggctgcgtcgtcgttcttgacggc
gcgatcgttggcgaaggttttcatcagcgatttggcggtccgcacgccgaggtcaacgcc
ttgaaggcagccggcgatcgggcgaagggcgcgaaactcttcgtcacgctcgagccctgc
tgccacacaggcaagacgccgccgtgcgttgaggcggtgctcgccgctggcgtgaagcgg
gtcgtcatcgcgatgcgcgatccgttcccgaaggtcgatggcggcggcatccgcgcgctc
gaagcggcgggcgtcgagtgcgttgtcggcgtgctcgaagacgacgcgcggcgactcgtg
gcgccgtacctcaagctcctcgagacgggccggccgtgggtgatcgccaagtgggcgatg
acgctcgacggcaagatcgccactagcacgctcgacagccagtggatcagcaacgaagcg
tcacgggcccgcgtccaccgactacgcggtcgcgttgacgccgtcatcgtcggcgcccga
acactcgtcgccgacgacccgctgctaaccgcccgtcccaccggaccgcggacgccgctg
cgtatcgtgatcgccggtgacaaaccgctgcccatcgatcgcaagctttggaacaccccc
gacgatggcgccgtgctcgttgcggtcggagaaggctatcccgccgccgatgcgcagcaa
ctacgcgaccgcggcgtcgaagtcctcaccgcaacgcccccgcaacttctcgacgaactc
ggccgccgccgactaacgaacgtcctcgtcgaaggcggcggcaaactgctcggccaattc
ttcgatcagcaactcatcgacgaatcctgggcgttcgtcgcccccaagctcatcggcgga
acgggtcccggacccatcggcggcgaaggcgtcgccttcatgcgtgacgccctgacattc
accgaagtcacccacgaatcaatcgacggcgaccttctcatccgcggtcgtacaaagctg
gaaccgcgaatggacgcgaatcatcgcgaatag

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