Bacillus methanolicus: BMMGA3_01335
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Entry
BMMGA3_01335 CDS
T03209
Symbol
sigB
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
bmet
Bacillus methanolicus
Brite
KEGG Orthology (KO) [BR:
bmet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmet03021
]
BMMGA3_01335 (sigB)
Transcription machinery [BR:
bmet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BMMGA3_01335 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_3
DUF1492
DUF134
IF2_N
KORA
HTH_28
NirdL-like_HTH
HTH_37
DUF2316
SieB
Motif
Other DBs
NCBI-ProteinID:
AIE58757
UniProt:
I3E3R3
LinkDB
All DBs
Position
243352..244146
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AA seq
264 aa
AA seq
DB search
MQKQSQPNLISKQEINDLIKAYQEHQDEEAQNKLVLHYQNLVATIARKYSKGGSYHEDIV
QVGMIGLLGAIRRYDESIGKSFEAFAVPTIIGEIKRFLRDKTWSVHVPRRIKELGPKIKS
TVEELTTKLHRSPKVEEIAEALNVSEEEVLEAMEIGKSYQALSVDHSIEADADGGTVTLL
DIVGTVDEGYERINQKLVLEKALPVLTDREKKIIQYTFLENMSQKDAGDKLGISQMHVSR
LQRRAIKKLQEAIHTDINNTECLS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaacaatctcaacctaatctaatatcgaagcaggaaatcaacgatttgattaaa
gcatatcaagagcatcaggatgaagaagctcaaaataagcttgtgcttcattaccaaaac
cttgttgcaacgattgcccgtaaatactcaaaaggcgggtcatatcatgaagatatcgtc
caagtcggaatgattgggttgttgggtgcgattcgccgttatgacgaatcaattggcaaa
agttttgaagcgtttgcggttccgacgataatcggtgagattaaacgctttttgcgggac
aaaacgtggagtgttcatgttccgcggcggattaaagagcttggtccaaaaattaaatcg
acagtagaagaactgacaacaaaactgcatcgctcaccgaaagtggaagaaattgcagaa
gccttaaatgtttctgaagaagaagtacttgaagcaatggaaataggaaaaagttatcaa
gctttatcagtggaccattccattgaagctgacgcagatggcggaaccgttacattgctg
gatattgtaggtacggttgatgaaggatacgaaaggattaaccaaaaacttgttttagaa
aaggctcttcctgttttaacagatcgggaaaagaaaattattcagtacacctttttggaa
aatatgagccaaaaggatgcaggagataaattggggatttcacaaatgcatgtttcccgt
ttgcaaagaagggccattaaaaagcttcaggaagcaatacatactgatattaacaacacg
gagtgtctttcatga
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