Bacillus methanolicus: BMMGA3_02700
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Entry
BMMGA3_02700 CDS
T03209
Symbol
recQ
Name
(GenBank) putative ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bmet
Bacillus methanolicus
Pathway
bmet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMMGA3_02700 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmet03019
]
BMMGA3_02700 (recQ)
03400 DNA repair and recombination proteins [BR:
bmet03400
]
BMMGA3_02700 (recQ)
Enzymes [BR:
bmet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BMMGA3_02700 (recQ)
Messenger RNA biogenesis [BR:
bmet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BMMGA3_02700 (recQ)
DNA repair and recombination proteins [BR:
bmet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BMMGA3_02700 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIE59004
UniProt:
I3E328
LinkDB
All DBs
Position
526661..528832
Genome browser
AA seq
723 aa
AA seq
DB search
MFEKAQQLLQSYFGFPSFRKGQEQAIRFVLEGKNSLCVMPTGGGKSICYQIPSLVMPGTT
IVVSPLISLMKDQVDALLQLGISATYINSSISLSEANERMMEAKQGRYKLLYIAPERLES
REFKENLKSMEIPFVAVDEAHCISQWGHDFRPSYRHIRRMVNNLKKKPIVLALTATATPM
VREDICKSLDIDEKNTVMTGFERENLSFSVIKGQDRLLFLKDFLKKNNKESGIIYAATRK
MVDQLYERLKKENMNVGRYHAGMSDLDRMREQDQFLAEKTTVMVATSAFGMGIDKSNIRY
VIHFQLPKNMESYYQEAGRAGRDGLASECIVLYSPQDVQVQRFLIDQSSERNRISQELEK
LQLMVDYCHTENCLQAYILQYFGERETESCGRCGNCTDSRASVDVTKEAQMVLSCIVRMG
QKFGKTITAQVLTGSKNKKITELHFHKLSTYGIMKEKSAKEVSDFIEFLISQEMIGVNHG
SFPTIFVTEKGKNVLLGKQVVRKKEAVLTKQVANDDPLFDRLRIIRRSIAEMEKVPPFVI
FSDTTLKDMCIKLPQSDEEFLQVNGVGENKLKKYGEVFISAIISYCDEHPERLLKKATER
SFKKKTKKAERDSHLVTYEMFLNGLSLKEISGKRELALATVENHLLLCAEQGLDVDFEAL
IPAEYMPLLKRAIEEAGSDRLKPIKEQLPEEVTFFMIKAFLFLNKNKLKLMKDKSVRDRP
SSW
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgagaaagcacagcaattgttgcaatcctattttggttttccctcttttcgaaaa
ggccaggaacaggcaatacgctttgtattagagggtaaaaactcactttgcgtgatgccg
acgggcggtggaaaatctatttgttatcaaattccttctttggtaatgccaggaactaca
atcgttgtttctccgcttatttcgctgatgaaagatcaagttgatgctctattgcagttg
ggcatttcggcaacgtatattaacagctcaatcagtttgagtgaagcaaacgagcggatg
atggaagccaaacaaggacgatataagcttttatatattgctccggagagattggaatcc
cgagagtttaaggaaaatctgaaaagcatggagattcctttcgttgctgtagatgaagca
cactgtatttcccagtgggggcatgactttaggccaagctaccgccatattcgcagaatg
gtaaacaatctgaagaaaaaaccaattgttcttgctttaacagccactgccacgcccatg
gtacgagaggatatttgtaaatctcttgatattgatgaaaaaaatacggttatgacgggt
tttgaaagggaaaacttatccttttccgtcattaaaggacaggatcgacttctcttttta
aaagattttctgaaaaagaacaataaagaatctggcattatctatgcggccacgaggaaa
atggttgaccagctttatgaaaggctgaaaaaagaaaatatgaatgtcggtcgttatcat
gccggtatgagcgatttggacaggatgagagagcaggatcaattcctagcagaaaaaacg
actgtaatggttgctacatctgcctttggtatgggaatagataaatcaaatattcgttat
gttattcatttccagcttcctaaaaacatggaatcctactatcaagaggcgggccgtgct
ggcagggacgggcttgctagtgaatgtatcgttctttattctccgcaggatgtgcaagtt
cagcgatttttgattgaccagtcgagtgaaaggaaccggatatcacaggaacttgaaaag
ctccaattgatggtggattattgccatacagaaaattgtttgcaggcttatatattacag
tattttggcgaaagagagacagagtcatgtggacgttgtggcaattgtactgattcccgt
gcaagtgttgatgtcacaaaagaagcacaaatggtgttgtcatgtattgtccgaatgggg
cagaagttcggcaagacgatcacagctcaggttttaaccggatcgaaaaataagaaaatt
acagagctccactttcataaactttccacatacggaatcatgaaggaaaaaagcgcaaaa
gaagtaagtgactttatcgaattcctaatttcacaggaaatgattggagtgaaccatggt
tcattcccaacgatttttgtcacggaaaaaggcaagaatgtattgcttggaaagcaagta
gttcgcaaaaaagaagctgtgctaacaaagcaagtagctaatgatgatcctttatttgat
cgcttaagaataattagaagaagtattgcggaaatggaaaaggtgccgccgttcgttatt
ttttcagatacaactttaaaggatatgtgtataaaactgcctcagtccgacgaagagttc
ttacaggtaaatggggtaggagagaataagctgaaaaaatacggagaggttttcatcagt
gccataatctcatattgtgatgaacatccagagcgcctgctcaaaaaggcaacagaacgt
tcttttaaaaagaaaacaaaaaaagcagaacgggactcacaccttgtgacgtacgaaatg
tttttgaacggtttatcgttgaaggaaatttccgggaagagggaacttgcacttgctaca
gttgagaatcatttgttgctctgtgcagagcaagggctggatgtcgactttgaggctctc
atccctgccgaatacatgccattactaaaaagggcaatagaggaggccggcagtgacagg
ctgaagccaatcaaagagcagctcccagaggaagtcacattttttatgattaaagcattt
ctgtttctaaacaagaacaagttaaaattgatgaaagacaaatcagtgagggacaggccc
tcatcatggtaa
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integrated database retrieval system
