Bacillus methanolicus: BMMGA3_06340
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Entry
BMMGA3_06340 CDS
T03209
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bmet
Bacillus methanolicus
Brite
KEGG Orthology (KO) [BR:
bmet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmet03016
]
BMMGA3_06340 (truB)
Enzymes [BR:
bmet01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BMMGA3_06340 (truB)
Transfer RNA biogenesis [BR:
bmet03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BMMGA3_06340 (truB)
Prokaryotic type
BMMGA3_06340 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AIE59696
UniProt:
I3DZF6
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All DBs
Position
1243429..1244343
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AA seq
304 aa
AA seq
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MDGILPLFKPKGMTSHDCVFKLRKMLKIKKIGHTGTLDPDVNGVLPICIGKATKVAEYIT
EAGKTYEGEVTIGYSTTTEDASGDIVEQMPGIKTFTREEILQVLHSFRGEIVQTPPMYSA
VKVNGKRLYEYARLGIEVERPSRKVTIYSIELLDERNIFEGETVTFRFRVSCSKGTYIRT
LAVMIGEKLGFPAHMSDLIRIQSAGFTLADSLTFEQIQTMIDNETISEALFPVEAALSHL
PKYQLDDKVAEKVKNGAVLSTPKQLEKLDGPVVFETKTGIALAIYKLHPLKKGFMKPEKV
LRNE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtggatggtattttaccacttttcaagccaaaaggaatgacttctcatgattgtgttttt
aagcttcggaaaatgctcaaaatcaaaaaaatcggccatacgggaactttggatcccgat
gttaacggagtattaccaatttgcattggcaaagcaacgaaagtagcggaatacataaca
gaagctggaaaaacatatgagggagaagtgaccattgggtattcaaccacaactgaagat
gcttcaggggacattgttgaacaaatgccagggattaaaacatttacaagggaagagatc
cttcaagtcttgcattcctttagaggtgaaattgtccagacacctcccatgtattcagcc
gttaaagttaatggaaaacgattatatgagtatgcgagactaggaatcgaagttgaacgg
ccaagcaggaaggtaaccatctattccattgaacttttggatgagagaaacatttttgaa
ggcgagacggtaactttccgtttccgcgtttcgtgcagcaaaggaacttacatccgaacc
cttgcagtcatgataggcgaaaaactcgggttccctgcccacatgtctgatttgataaga
attcaatctgccggtttcaccttggctgattctctgacctttgaacaaatacagacaatg
attgataatgaaaccatttctgaagctctatttccggttgaagctgcgctgtctcatttg
ccgaaatatcaattagatgataaagtagcagagaaagtaaaaaatggtgctgttttaagc
actcctaaacaattagaaaaattggatgggcctgtcgtttttgaaacaaaaacggggatc
gcgttagctatttataagctgcatcctttgaaaaaaggcttcatgaaacccgagaaagtt
ttaagaaatgaataa
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