Bacillus methanolicus: BMMGA3_12270
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Entry
BMMGA3_12270 CDS
T03209
Symbol
yrrC
Name
(GenBank) putative protein YrrC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bmet
Bacillus methanolicus
Pathway
bmet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BMMGA3_12270 (yrrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmet03400
]
BMMGA3_12270 (yrrC)
Enzymes [BR:
bmet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BMMGA3_12270 (yrrC)
DNA repair and recombination proteins [BR:
bmet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BMMGA3_12270 (yrrC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
UvrD-helicase
AAA_22
AAA_28
AAA
nSTAND3
T2SSE
NTPase_1
UvrD_C
AAA_16
AAA_17
DEAD
STAT2_C
DUF4926
TsaE
NPHP3_N
DUF4037
NB-ARC
WHD_MCM
Motif
Other DBs
NCBI-ProteinID:
AIE60847
UniProt:
I3EAU0
LinkDB
All DBs
Position
complement(2428526..2430940)
Genome browser
AA seq
804 aa
AA seq
DB search
MAEKQSTLNLFADDQKYIKGKHLVTIFHNDQNLYTVLRIRVEETNENYEEKEAVITGYFP
RLHEHETYTFFGQMKEHPKFGLQFHANHFRKEMPQSKQGVINYLSSELFKGIGKKTAENI
VATLGENAISRILNEPSLLDTVPKLPPDKAKMLYDTLMEHQGLEQIMVALNQYGFGPQLS
MRIYQVYKDETLDIIKSNPFKLVEDIEGIGFGRADELGYQLGITGNHPDRIRAACLYTLE
KESLQAGHVFLNAEDLLESVKKLLEENQPEKIDYTDISNELLKLQEEGKIIGEEKRIYLP
SLYFAEKGLVTNIKRILSQTEYENQFPESEFLLALGKLEERLGVQYAPTQKEAIQTALMS
PMMILTGGPGTGKTTVIKGIVELYAELHGCSLDPKDYRKDEPYPFLLAAPTGRAAKRMSE
STGLPAVTIHRLLGWNGNEGFDRNEDHPLEGKLLIVDETSMVDVWLANQLFKALPEQIQV
ILVGDEDQLPSVGPGQVLKDLLQSERIPTVRLTDIYRQAEGSSIIELAHEMKNGRLPEGI
SEQKPDRSFIKCTTAQIAQVVEKVVINAKKKGYSAKDIQVLAPMYRGPAGIDRLNVILQE
IFNPNPDGTRKEITFGDVKYRIGDKVLQLVNQPENNVFNGDIGEIVSIFYAKENTEKQDM
VVISFEGTEVTYTRQDLNQITLAYCCSVHKAQGSEFQIVILPVVRSYYRMLRRNLIYTAI
TRSKQFLILCGEEDALRLGVERTDDQIRNTSLCEKLQEQIPTLELTENNEKDELLVSIEE
ILMNEDPMIGMENITPYDFMVDEG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaaacaatctacactcaatttgtttgcggacgatcaaaaatatattaaaggc
aaacatcttgttacgatctttcataatgaccaaaatttgtacacagtattgcgtatacga
gtggaagaaacaaatgagaattatgaagagaaggaagctgtgattaccggttattttccc
cgccttcatgaacatgaaacctatacattttttggccagatgaaggagcacccgaaattt
ggtcttcagttccatgcaaatcattttaggaaagaaatgcctcagtctaagcaaggtgtc
attaattatttatcaagtgaactttttaaaggaattggaaaaaagactgctgaaaatatt
gttgcaactcttggcgagaatgcaatctcaagaattttaaatgagccatcattgctcgat
acagtaccaaagcttcctccggataaagcaaagatgctatatgatacccttatggagcat
caagggctagaacaaataatggttgcactaaatcaatatggcttcggaccgcaattgtca
atgagaatttatcaagtttataaggacgaaacccttgatattattaaatcgaatcctttc
aagcttgtagaagatattgaagggattggttttggtcgagcagacgaactcggatatcaa
ctcggcattacaggaaaccatccggacagaataagagccgcttgtttatatacgctggaa
aaagagagcttgcaagcaggacatgtcttcctaaatgcagaagatttgcttgaaagtgtc
aagaagcttcttgaagaaaaccagcctgaaaaaattgattatacagatatttctaatgaa
cttcttaagcttcaagaagaggggaaaattattggggaagaaaagcggatttatttgcct
tccctttattttgcggaaaaagggctggtgacaaatataaagcgaattttatcgcaaaca
gagtacgaaaaccagttccctgaatcagaatttctgcttgcacttggaaaactagaggaa
agactcggtgttcagtatgccccgacgcaaaaagaagcgatccaaaccgcgcttatgtcg
ccgatgatgattttaactggagggcctggaaccgggaaaaccactgtcataaaaggaatt
gtcgaactatatgccgaactgcacggctgttcattagaccctaaggactaccgaaaggac
gagccatatccttttttgctggcggccccaaccgggcgcgctgcaaaaaggatgagcgaa
tcaacgggattgccggcagtgaccattcatcgcctgcttggctggaatggaaacgaaggc
tttgatcgtaatgaagatcatccacttgaaggaaaattgcttattgtcgatgaaacttct
atggtcgatgtgtggctggcaaatcaattatttaaggcattgcctgaacaaattcaggta
atcctggtcggtgatgaagatcaattgccatcggtggggccgggtcaagtattaaaagat
ttgctgcaatcggaaagaattcctacggtccgattaacagatatttatcgccaggctgaa
gggtcatccatcattgaactagcccacgaaatgaaaaatggcaggctgcctgaaggaata
tcggaacagaagcctgatcgttcgtttataaagtgcactactgcacaaattgcccaagtt
gtcgagaaggtcgtcataaatgcgaagaaaaaagggtattcagcaaaggatattcaagta
ctcgccccgatgtatcggggaccggcaggaattgatcgcttaaatgttatattgcaggaa
attttcaatccaaatcctgacgggacgcgaaaggaaatcactttcggggatgtgaagtac
agaattggcgataaagttcttcaactcgtaaaccagccggaaaataatgtttttaacgga
gatatcggagaaattgtatcgattttttatgcaaaagaaaatactgaaaaacaagatatg
gttgtgatctcttttgaagggacagaagttacgtatactcgccaggacttgaaccaaata
acccttgcctactgttgttctgttcataaagcgcaaggaagcgaatttcaaatcgtgatc
cttcctgtcgtaagaagctattaccgaatgctgcgcagaaatcttatatatacggctatt
acaagaagcaaacagtttcttattttgtgcggtgaagaagatgcattgagattgggtgta
gaaagaacggatgatcaaatccgcaatacatcattatgcgaaaagcttcaagagcaaatt
cctactcttgagctgacagaaaataatgaaaaagacgaacttcttgtttctattgaagag
atattgatgaatgaggatccgatgatcggaatggaaaatataacaccatatgattttatg
gtggatgaaggttaa
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