Bacillus methanolicus: BMMGA3_12880
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Entry
BMMGA3_12880 CDS
T03209
Symbol
lcfA
Name
(GenBank) Long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bmet
Bacillus methanolicus
Pathway
bmet00061
Fatty acid biosynthesis
bmet00071
Fatty acid degradation
bmet01100
Metabolic pathways
bmet01212
Fatty acid metabolism
bmet02024
Quorum sensing
bmet04146
Peroxisome
Module
bmet_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bmet00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BMMGA3_12880 (lcfA)
00071 Fatty acid degradation
BMMGA3_12880 (lcfA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BMMGA3_12880 (lcfA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
BMMGA3_12880 (lcfA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bmet01004
]
BMMGA3_12880 (lcfA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bmet04147
]
BMMGA3_12880 (lcfA)
Enzymes [BR:
bmet01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BMMGA3_12880 (lcfA)
Lipid biosynthesis proteins [BR:
bmet01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BMMGA3_12880 (lcfA)
Exosome [BR:
bmet04147
]
Exosomal proteins
Exosomal proteins of breast milk
BMMGA3_12880 (lcfA)
Exosomal proteins of breast cancer cells
BMMGA3_12880 (lcfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AIE60968
UniProt:
I3ECN9
LinkDB
All DBs
Position
complement(2565648..2567351)
Genome browser
AA seq
567 aa
AA seq
DB search
MSENRSWLKNYPEEIPSSLTYDSKPLQQYLIKAAEDYPEKCAIHFMGKEVTYKELLKFAV
KLAGYLQELGIKKGDRVAIMLPNTIQSVIAYYGILMAGGIVVQTNPLYMERELEFQMKDS
GAKAIITLDILVPRVSKVIPHTDVKHIIVTAIKDFLPFPKKLIYPFIQKKQYEIVVDVKH
EGNHHLLMEILKKPSRQVKEHELNIEEDLALLQYTGGTTGYPKGVMLTHKNLVANAVMCQ
AWLYKCKRGEEVVLGILPFFHVYGMTTVLILSVMQAYKMVLLPKFDAKTTLKTIQKQRPT
LFPGAPTIYIGLLNHPDLKKYDLSSIDSCISGSAPLPLEIQQKFEEVTGGKLVEGYGLTE
SSPVTHSNFLWDRPRVKGSIGVPWPDTDACIFSIETGEMLSPGEIGEIAVRGPQIMKGYW
NKPEETAQVLRDGWLLTGDLGYMDEEGYFYVVDRKKDMIIAGGLNIYPREVEEVLYEHPD
VQEVVVAGIPDPYRGETVKAYIVLRKGASISTEEMDQFARKHLAAYKVPRAYEFRDELPK
TAVGKILRRALVDEEKKKMEENEKKQA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaatagaagctggttaaaaaattatccggaagagatcccttcatcattaacc
tatgatagtaaaccattgcagcagtatttaataaaggctgctgaagattatcctgaaaaa
tgcgcaatccattttatggggaaagaggtcacttataaagaacttttaaaatttgcagtt
aaacttgctggatatttacaggaactcggcattaaaaaaggcgacagggttgcgattatg
cttccaaatacaatacaatctgtaatcgcttattatggaattttaatggctggcggcatc
gtagttcaaacaaacccattgtacatggaacgagaacttgagtttcaaatgaaagattct
ggcgctaaagccattatcacccttgatattttagttccaagagtatcaaaagtaatacct
catacggatgttaaacacattattgtaaccgctatcaaagattttttgccttttccaaaa
aaacttatttatccatttattcaaaaaaagcagtatgaaattgttgttgatgttaaacat
gaaggcaatcatcatttactaatggaaattttaaaaaagccgtcaagacaagtaaaagag
catgaattgaatattgaagaagaccttgcactgctccaatataccggtggaacgacaggt
tatccgaaaggtgttatgcttacacataaaaatctcgtagctaacgctgtcatgtgccaa
gcatggctttataaatgcaagcgcggggaagaagtagttcttggaatccttccttttttc
catgtgtatggaatgacaacagtattaatactttctgttatgcaggcatacaaaatggtt
cttttgccaaaatttgatgctaaaacaaccttaaaaacgatacaaaaacaacggccaacg
ttatttccaggagccccaacaatttatatcggactgctaaaccatcctgatcttaaaaaa
tatgatctttcatcgatcgattcctgcattagtggatcagctccgttgccgttagaaata
cagcaaaaatttgaggaagtaacaggagggaagctcgttgaaggctatggattaaccgaa
tcatcccctgtaacacattcaaacttcctttgggatcgtccaagagttaaaggcagtatc
ggtgttccgtggccggatacagatgcctgtatattttcgattgaaacaggagaaatgttg
tctccgggcgaaattggagaaatcgcagtcagagggccacagattatgaaaggctattgg
aataagccggaggaaacagcccaggttctgcgcgacggatggctgttaactggagatctc
ggatatatggatgaggaaggatacttttatgttgttgaccggaaaaaggatatgattatt
gccggaggattgaacatctatccgcgcgaagttgaggaagtcctgtatgaacatccggat
gttcaggaggttgtagtggctggaattcctgatccttatagaggcgaaacggttaaagcg
tatattgtgctgcggaaaggcgcttcaatctcaactgaagaaatggatcaatttgcgcgg
aaacacctcgcagcctataaagttccgagagcatatgaattcagggatgaacttccaaaa
acagctgtcggcaagattttgcgaagagctttagtagatgaagagaaaaagaagatggaa
gaaaatgaaaaaaaacaggcttaa
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