Bacillus methanolicus: BMMGA3_13110
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Entry
BMMGA3_13110 CDS
T03209
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bmet
Bacillus methanolicus
Pathway
bmet03030
DNA replication
bmet03430
Mismatch repair
bmet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMMGA3_13110 (dnaE)
03430 Mismatch repair
BMMGA3_13110 (dnaE)
03440 Homologous recombination
BMMGA3_13110 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmet03032
]
BMMGA3_13110 (dnaE)
03400 DNA repair and recombination proteins [BR:
bmet03400
]
BMMGA3_13110 (dnaE)
Enzymes [BR:
bmet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMMGA3_13110 (dnaE)
DNA replication proteins [BR:
bmet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMMGA3_13110 (dnaE)
DNA repair and recombination proteins [BR:
bmet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMMGA3_13110 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AIE61012
UniProt:
I3ECJ3
LinkDB
All DBs
Position
complement(2615669..2619034)
Genome browser
AA seq
1121 aa
AA seq
DB search
MSFIHLHVYSSYSLLTSTITIEQLVSEAKNKRFPALALTDRNVMYAAVAFYKECLKHSIK
PILGLTVDVLSELSESSSFPLVLLAKNQTGFQNLLKITSVVQTKSPQGIPIKWLRHYAQG
LFALTPGIEGEIEHYLLNNEPEKAKQAALSLAGLFEENSFYISLQNHGIKVEQQLIPELA
RLAEETGIGIVATNRVHYLEQKDAFAHECMLAIKNGEKLQDEGRERLGSDQFYFKTAEEM
TELFYEYPDALENTIHIAEQCNVLLEMDKQFLPKYPVPDGETADSFLEKLCLQGLNERYK
DRAEEHKERLMYELGVIKRMKFSDYFLIVWDFMKFARGRGILTGPGRGSAAGSIVAYVLY
ITDVDPIEHQLLFERFLNPERISMPDIDIDFPDNRREEVIEYVVEKYGELHVAQIITFGT
LAAKAAIRDVGRVFGLNAKELDRLSKMIPSRLGVSLKEAYKESEQLRTFVNESKLNRKLF
ETALKLEGLPRHTSTHAAGVVISEEPLINVIPIQSGHDKVYLTQYSMEHLEDIGLLKMDF
LGLRNLSLIEAIIQSIQRKTGKKINIHDIPLDDPKTFELLSKGDTTGIFQLESEGMRKVL
TRLMPTRFEDIVAVNALYRPGPMENIPLYIDRKHGREKTDYPHPDLEPILKNTYGVIVYQ
EQIMQIASKMAGFSLGEADLLRRAVGKKQRDVLDKERHHFVKGALNKGYSEQTANQIYDL
IVKFANYGFNRSHAVAYSFIAYQLAYLKAHYPLYFMAALLTSVSGNETKIAQYVRELKQM
GMKILPPSINKSGYSFQVENGAIRYSLSSIKGVGIAVLKEIFQARRTKPFDDLFDFCLRV
SAKAVNRKTLEALIHSGSFDEFGQDRAVLLATIDIAMEHAQLVKPDDTNQYDLFSEEEFL
LKPKYMQVDPINIEDKLAFEKEVLGFYLSEHPVSAYEDLLKRAAVQQLAELAQSRRSAII
AAYITELKKIRTKKGEAMAFLTLSDPSGEIEAVVFPAPFKKLSGILKQGSILLFEGKIEE
RERHKQFIIQNAKDIRQMEDHLKTEGPKLYLKIETEKQSPEQLQFLKSIIRKYKGRTRIV
LYYERADKTILLSDEDRIDPSEECLNELKDFLGKSNVVLRK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttttattcaccttcatgtatatagttcatacagtcttcttaccagcacaattacg
atcgaacaattggtcagcgaagcaaagaacaagcggtttccggcattggcattaactgat
cgcaatgtcatgtatgccgctgttgctttttataaagagtgtttaaagcattcgattaag
cctattttagggctgacagtagatgtcttaagcgaattatcagaatcaagttcttttccg
cttgtgttattggcaaaaaatcaaacaggatttcaaaatctattaaaaatcacaagtgtt
gtccaaacgaaatctccacaaggaattccgattaagtggctcaggcattatgctcaagga
ctatttgccttgacgccgggaattgaaggagaaattgagcattatttactaaataatgaa
ccggaaaaagcgaagcaggcagcgctttctcttgccggtctatttgaagaaaattctttc
tatattagcttgcaaaaccacggaataaaagttgagcagcaattgattccggaattggca
aggcttgcggaagaaaccggaatcgggattgttgcaacaaatcgtgtccattacttagaa
cagaaagatgcatttgcccacgaatgtatgctggcaatcaaaaatggtgaaaaactgcag
gatgagggccgcgaacggcttgggagcgatcaattttatttcaaaacagcagaggaaatg
acagagttattttatgaatatcccgatgcgctggaaaatacgattcatattgctgaacaa
tgcaatgttcttctcgaaatggataaacaatttcttccaaagtatccggtgcctgacggc
gaaaccgcagacagttttctcgaaaaactttgtttgcaaggattgaatgagagatataag
gatagagcagaagagcataaagaacgtttaatgtatgagctaggcgtgatcaagaggatg
aagttcagtgattattttctgatcgtttgggattttatgaagtttgcacgcggccggggg
attttaacgggacctggcaggggatctgcagctggctccatcgtggcctatgttctttat
ataacagatgttgatccgattgagcatcagctgctttttgaacggtttttgaatcccgaa
cggatttccatgcctgatatcgatatcgattttcctgacaaccgccgcgaggaagtaatc
gaatatgttgtggaaaaatacggcgagcttcatgttgcgcaaattattacgtttggaacg
ctggcggctaaagcggcgatcagagacgttggcagggtatttggccttaatgcaaaagaa
ttggataggctttcgaaaatgattccatcaaggcttggagtcagtttgaaagaagcttac
aaggaatcagaacagcttcgaacatttgtgaatgaatcgaaattgaaccgaaagctgttt
gaaacggccttaaagcttgagggcttgccaagacatacatcaacacatgcagccggagtt
gtcataagcgaagagccgcttattaatgtcatcccgatccagagcggccatgataaagtc
tatttaactcagtattcaatggaacatcttgaagatatcggattattaaaaatggatttt
ctcggtttaagaaacttatcattaatcgaagcaatcattcaatccattcaaagaaaaaca
gggaaaaagataaatattcacgatattcctctagatgatccaaaaacttttgagttatta
agcaagggagatacgacaggaatttttcagcttgaatcagaaggaatgcgaaaagtgttg
actcgtttaatgccaacgaggtttgaagatatcgttgcggttaatgcactttaccgcccg
ggcccaatggaaaatatcccgctttatatcgatcggaagcacgggcgcgaaaagacagac
tatccgcatcccgatcttgagccaatcttaaaaaatacgtatggtgttattgtctatcaa
gagcagattatgcaaattgcttcaaaaatggcagggttttctctcggggaagcggatctc
cttcggcgcgctgtcgggaaaaaacagcgtgatgtcctagataaagaacggcatcatttc
gtgaaaggggcactgaataagggctacagcgaacaaacagccaatcaaatttatgatttg
attgttaaatttgccaattacggatttaaccgcagccatgcagtggcatacagctttatc
gcctatcaacttgcctatttaaaggcacattatccgctttattttatggcggcccttctt
acatctgtttccggaaacgaaacaaaaatcgcacaatatgttcgcgaactaaagcaaatg
ggtatgaagattctccccccttcaataaacaaaagcggctattcgtttcaagttgaaaac
ggggcaatccgctacagcctctcaagcattaaaggtgtggggatagcggtattaaaggag
atttttcaggcacgaaggacaaaaccgtttgatgatttatttgatttttgtttgcgagta
tctgcaaaggcggtcaatcgaaagactcttgaagctcttattcattcaggaagttttgat
gagtttgggcaagaccgggccgttttgcttgccaccattgatattgcaatggaacatgcc
cagcttgtaaaacctgatgacacgaaccagtatgatttattttcagaggaagagttttta
cttaaaccaaaatatatgcaggtggatccgatcaacattgaagacaaacttgcatttgaa
aaagaagtattaggtttttacttatcagaacaccctgtttccgcatatgaagatttactg
aaaagagcagccgttcaacagctggcagaacttgctcaaagccgccggtctgcgattatt
gccgcttatattacagaattaaagaaaatcaggaccaaaaaaggggaagcgatggcattt
ttgactttaagcgatccaagcggagaaatagaggccgttgtatttccggctccttttaaa
aaattaagcgggattctaaaacaaggaagtattctactatttgaaggaaagattgaagaa
cgtgagagacataaacaattcattattcaaaatgcaaaggatatccgacaaatggaagac
cacttgaaaacagaaggccctaagttatatttaaaaatcgaaacagaaaagcaatcaccg
gaacaactgcaatttttaaaatcgatcattcgaaaatataaagggagaacaagaattgtc
ctttattacgagcgggctgataaaacaatattgctgtctgacgaggacagaatcgatcca
tcggaagagtgtctgaatgaactgaaagattttttgggcaagagcaatgttgttttgagg
aaataa
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