Brucella abortus 2308: BAB1_1128
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Entry
BAB1_1128 CDS
T00304
Name
(GenBank) Cytochrome c heme-binding site:ATP/GTP-binding site motif A (P-loop):ABC transporter:Excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
bmf
Brucella abortus 2308
Pathway
bmf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAB1_1128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmf03400
]
BAB1_1128
DNA repair and recombination proteins [BR:
bmf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAB1_1128
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BAB1_1128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_25
DnaJ_CXXCXGXG
nSTAND1
AAA_21
RsgA_GTPase
AAA_33
AAA_23
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
CAJ11084
UniProt:
Q2YPX5
LinkDB
All DBs
Position
I:1092053..1094977
Genome browser
AA seq
974 aa
AA seq
DB search
MSDQKFISIRGAREHNLKNVDLDLPRDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGI
PYSPATGLPIESQTVSQMVDRVIALEEGTRLYILAPIVRGRKGEYRKELAELQKKGFQRV
KVDGTFYEIADVPPLDKKYKHDIDVVVDRVVVRPDLSTRLADSLETCLKLADGLAIAEFA
DKPLPVGETAEGGSANKSANETHERILFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPT
CDGLGTQQAIDPNLIIPDESAALKDGAVAPWARSSSPYYNQTLEALGKAYGFKVSARWSE
LSEEARQAILYGTKGREITFHYDDGLRSYQTTKPFEGVIPNLERRWKETDSAWSREEIER
FMASTPCPACNGYRLKPEALSVKIGKKHIGEITEMSIRKADAWFRDIDGSFNEKQREIAA
RILKAIRERLQFLNNVGLDYLTLARNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSI
GLHQRDNARLLDTLRHLRDLGNTVIVVEHDEDAILTADYVVDIGPAAGVHGGKVIAQGSP
QDIMANTNSLTGKYLSGAMEVAVPAERRKISKTKRLRVVGARGNNLKNVSADIPLGTFTA
VTGVSGGGKSTFLIETLFKAASRRIMGSREHPAEHDRIEGLEFLDKVIDIDQSPIGRTPR
SNPATYTGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPD
VYVTCDVCHGKRYNRETLDVLFKGKSIADVLDMTVEEGAEFFSAVPAVRDKLETLVKVGL
GYIKVGQQATTLSGGEAQRVKLAKELSRRATGRTLYILDEPTTGLHFHDVAKLLEVLHEL
VEQGNTVVVIEHNLEVIKTADWVIDLGPEGGDGGGEIVAVGRPEDIVQEKRSYTGQFLKE
LLERRPKRSSQAAE
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcagaaattcatttccatacgtggcgcacgcgagcacaatctgaaaaatgtc
gatctcgatctgccgcgcgacaagctgatcgtgatgacggggctttctggctcgggcaaa
tcctcgcttgctttcgatacgatctatgccgaaggccagcgccgctatgtcgaaagcctt
tcagcctatgcgcgtcagtttctcgaaatgatgcagaaaccggatgtcgaccagattgac
ggcctgtcgcccgccatttccatcgagcagaagacgacaagccgcaatccgcgttcgacg
gtgggcacagtcaccgaaatctacgactatatgcgcctgctctttgcgcgtgtgggcatt
ccctattctcctgctaccggccttccgatcgaaagccagacggtgagccagatggtcgat
agggtcatcgcactggaggaaggcacacgtctttatatccttgcgcctatcgtgcgcggg
cgtaagggcgaatacaggaaggaactcgccgaacttcagaaaaagggcttccagcgcgtg
aaggtggacggcaccttctatgagatcgccgacgttccgccactcgacaagaaatacaag
cacgatatcgacgtagtggtagaccgcgtggtggtgcgcccggatttgtccacacgtctt
gcagacagtctcgaaacctgtctcaagcttgcggatggtctggccattgccgaatttgcc
gacaagcccctgccagtgggagaaacggcggaaggcggttcagccaataaatcagccaac
gaaacgcatgagcgcattcttttctcggaaaaatttgcctgcccggtttccggtttcacc
attcctgagatcgagccgcgcctgttctcgttcaacaacccgtttggtgcctgccccacc
tgcgacggtctcggcacgcagcaggccatcgatccaaaccttattattcccgatgaaagc
gcagcgctgaaagacggcgcggttgcaccatgggcgcgctcctcgtcgccctattacaac
cagacgctggaagccttgggcaaggcctatggtttcaaggtaagcgcgcgctggtcggaa
ctttccgaagaggcccggcaagccattctctatggcaccaagggcagggaaattaccttc
cattatgacgacgggctgcggtcttatcaaaccacgaagcctttcgagggggtgatcccc
aatctggaacgccgctggaaggaaaccgattcggcatggtcgcgtgaggaaatcgagcgc
ttcatggcctccaccccctgccccgcctgcaatggctatcgcctgaagccggaagccctg
tccgtaaagatcggcaaaaaacatattggcgagatcaccgaaatgtcgatccgcaaggcc
gatgcctggttccgcgacatcgatggcagctttaatgaaaagcagcgtgaaattgcagcg
cgcatcctgaaagcaattcgcgagcgcctgcaattcctcaacaatgtggggctcgactac
ctgacgctggcgcgcaattccggcacgctctctggcggcgaaagccagcgtatccgcctt
gcctcgcagatcggctcgggcctcaccggcgtgctttacgtgctggatgaaccatccatt
ggtttgcatcagcgtgataatgcccgcctgctcgacacgctgcgccacctgcgcgatctc
ggtaatacggtcatcgtggtcgagcatgatgaggacgcaatcctcaccgccgattatgtg
gtcgatatcggcccggcagcgggcgtgcatggcggcaaggtgattgcgcagggctcgccc
caggatatcatggcaaatacgaattcgctgacaggcaaatatctgtccggcgcgatggaa
gttgccgtcccggccgagcgtcgcaaaatttccaagaccaagcgcctgcgtgtcgtgggc
gctcggggcaacaacctgaagaatgtttcagccgatattccactcggcaccttcaccgct
gtcacgggcgtttcaggcggaggcaagtccaccttcctgatcgagacgttgttcaaggct
gcgtcgcgccgcatcatggggtcgcgtgagcatccggctgaacacgaccggatagagggg
ctggaatttctcgacaaggtgattgacattgaccagtcaccgatcgggcgcaccccgcgc
tccaacccggccacctataccggtgcgttcacaccaatccgcgactggtttgcgggcctg
ccggaagccaaggcgcgcggctatcagccgggccgcttttccttcaacgtcaagggcggg
cgctgcgaggcatgtcagggcgacggcgtcatcaagatcgagatgcacttcctgccagac
gtttatgtgacctgcgatgtctgccacggcaagcggtataaccgcgaaacactggatgtg
ctgttcaagggcaagtccattgccgatgttctcgacatgacagtggaagaaggtgctgaa
ttcttctccgccgtgccggccgtgcgcgacaagctggaaacgctcgtcaaggtcggcctc
ggttacatcaaggtcggccagcaggcgacgacgctttccggcggcgaagcgcagcgtgtg
aagcttgccaaggaactgtcgcgccgcgcaactggccgcacgctctatattcttgacgaa
cccaccaccggcctgcatttccacgacgtagcaaaactgctcgaagtgctgcacgaactg
gtggagcaaggaaacacggtcgttgtgatcgagcataatctggaagtcatcaagactgcc
gactgggtgatcgaccttggaccggaaggtggcgacggcggcggcgagattgttgccgtg
ggccgtccggaagacattgtgcaggagaagcggtcttataccggccaattcctcaaggag
ctgctggaacgccggcccaagcgcagctcccaagctgccgagtaa
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