Bacillus megaterium WSH-002: BMWSH_1024
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Entry
BMWSH_1024 CDS
T01890
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bmh
Bacillus megaterium WSH-002
Brite
KEGG Orthology (KO) [BR:
bmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmh03032
]
BMWSH_1024 (topA)
03400 DNA repair and recombination proteins [BR:
bmh03400
]
BMWSH_1024 (topA)
Enzymes [BR:
bmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BMWSH_1024 (topA)
DNA replication proteins [BR:
bmh03032
]
Prokaryotic type
DNA Topoisomerases
BMWSH_1024 (topA)
DNA repair and recombination proteins [BR:
bmh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BMWSH_1024 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AEN87908
UniProt:
A0A8D4BHX8
LinkDB
All DBs
Position
1045210..1047285
Genome browser
AA seq
691 aa
AA seq
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MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGIDIEQDYNPKYITIRGK
GPVLKELKTAAKKAKKIYLAADPDREGEAIAWHLAHSLDVDIASDCRVVFNEITKEAIKE
SFKHPRAINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSIAVRLIIDREK
EIAKFIPEEYWTVKATFQKGNDQFEGQLIEYQGKKVELSNENDVTNIVKQLDGNEFSISK
VTKRERKRNAAPSFTTSSLQQEAARKLNFRAKKTMMIAQQLYEGIDLGKEGTVGLITYMR
TDSTRISETAQTEARDYITNAYGNQFVATEKRKEKKNSNAQDAHEAIRPTSALRKPGEVK
EFLSRDQYRLYKLVWERFVASQMAPAIMDTMAVDLKNGDVTFRANGSKVKFPGFMKVYVE
GNDDQVEEKENLLPDLEEGEVAYSKDIDEKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALDNKRFVPTELGEIVLELVLEFFPEILDVEFTAKMENDLDEVEDGN
VQWVRVIDEFYSDFEKRLEHAEKEMREVEIKDEPAGEDCEECGSPMVYKMGRYGKFMACS
NFPDCRNTKPIVKEIGVKCPKCEEGNIVERKSKKKRTFYGCDRFPGCDFVSWDKPIARKC
PKCENLLVEKKQKKGTQVVCTSCDYKEEAQQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactacctagtaattgtagaatcgcctgcaaaggctaaaacaattgaacgttat
ttaggaaagaaatataaagtaaaagcatcgatgggacatgttcgcgatttacctaaaagt
caaatgggaatcgatattgaacaggattacaatccgaaatatattacaattcgcgggaaa
ggcccggttttaaaagaactaaaaacagcggctaaaaaagcaaaaaagatttacctagca
gccgatccagaccgtgaaggagaagcgattgcatggcacttggcgcacagtttggatgta
gacattgcatcggactgtcgtgtagtatttaacgagattacaaaagaagcgattaaagaa
tcttttaaacatccacgagcaattaatatggatttagtagatgctcaacaagcacgccgt
attcttgacaggctggttggctacaacatcagtccattgctgtggaaaaaagtgaaaaaa
ggattaagtgccggaagggttcaatcaattgcagtgcggttaattattgatcgtgaaaaa
gaaattgcaaagtttatcccagaagaatactggacggtaaaagcaacttttcaaaaaggg
aacgaccaatttgaaggccagttaatcgaatatcaagggaaaaaagtagagctatccaat
gaaaatgatgtaaccaacattgttaaacaattagatggaaatgaattttcaatttctaaa
gtaacaaagcgtgagcgaaagcgtaatgcggctccttcttttaccacgtcttcattgcag
caagaggcagcgcggaaattgaacttccgagcgaaaaaaacaatgatgattgcgcagcaa
ttatatgaaggaattgatttaggaaaagaaggtacagtaggtcttatcacgtatatgcgt
accgattctactcgtatttcagaaacagctcaaacagaagctagagattacattacgaat
gcatacggaaatcagtttgtggcaacggaaaagcgtaaagaaaagaaaaattcgaacgca
caagatgcccacgaagcgattcgtccaacttcagctcttcgtaagccaggagaggtaaaa
gagttcttatcgcgtgatcagtatcgactgtataagttagtatgggagcgcttcgttgct
agtcaaatggcacctgcaattatggatacaatggctgtagatttgaaaaatggagacgta
acatttagagcaaacggttctaaagttaaatttccaggctttatgaaagtgtatgttgaa
ggcaatgatgaccaagtggaggaaaaagaaaatcttcttccagacttagaagaaggagaa
gtagcttattctaaagacatcgatgaaaagcagcacttcacacagccaccgccaagatac
actgaagctcgtttagtcaagacattagaagagctaggcattggccgaccgtctacatat
gctccaacacttgacacgattcaaaagcgcgggtacgtagcgctcgataacaagcgtttt
gttccaacagaacttggagaaattgtactagagcttgtattggagtttttcccggaaatt
ttagatgtagagtttacagctaaaatggaaaacgatttggatgaagtggaagatggtaat
gttcaatgggtgcgtgttattgacgaattttacagtgattttgaaaaacgcttagaacat
gctgaaaaagaaatgcgcgaagtggaaattaaagatgaacctgccggagaagattgtgaa
gaatgcggttcacctatggtatacaagatgggacgctacggaaaatttatggcatgctct
aatttccctgactgccgtaacacaaagccaattgtaaaagagattggcgtaaagtgtccg
aaatgtgaagaaggaaatatcgttgagcgaaaatcgaagaaaaagcgtacattttatggc
tgcgaccgattcccgggctgtgacttcgtatcttgggataagccgattgcaagaaagtgt
ccgaaatgtgaaaatctgcttgtggagaagaaacagaaaaaaggaactcaagtcgtctgt
acaagttgtgattataaagaggaagctcagcagtaa
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