Bacillus megaterium WSH-002: BMWSH_1060
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Entry
BMWSH_1060 CDS
T01890
Symbol
sigD
Name
(GenBank) RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
bmh
Bacillus megaterium WSH-002
Pathway
bmh02020
Two-component system
bmh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BMWSH_1060 (sigD)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BMWSH_1060 (sigD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmh03021
]
BMWSH_1060 (sigD)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bmh02035
]
BMWSH_1060 (sigD)
Transcription machinery [BR:
bmh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BMWSH_1060 (sigD)
Bacterial motility proteins [BR:
bmh02035
]
Flagellar system
Flagellar assembly proteins
Stator
BMWSH_1060 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_5
UPF0175
Dbl7
HTH_Tnp_ISL3
HTH_IclR
HTH_24
UPF0122
KORA
MarR_2
YihI
Motif
Other DBs
NCBI-ProteinID:
AEN87944
UniProt:
A0A8D3WYS0
LinkDB
All DBs
Position
1078365..1079126
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AA seq
253 aa
AA seq
DB search
MKSIQEVEEHKIWQEWIETRDSHAGNMLVKKYMPLVNYHVQRISVGLPKNIHKEELRSLG
LVGLYDALEKFDYGRDLKFDTYASFRIRGAIIDGLRKEDWLSRSAREKTKRIEQATEALE
QRYLRRVAPSEVAKEVGMTEADVVHTMNEGFLANVLSMEEQPKEYEDGEQKYTIKDEKML
SPEEELINDERYQELAEVIEQLNEKEQLVVSLFYKEELTFTEIAQLLGLSTSRISQIHSK
ALFKMRTSLSKII
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaagtatacaagaagttgaagaacataaaatttggcaggaatggatagagacgaga
gactcacatgcgggaaacatgcttgtgaaaaagtatatgccgcttgttaactatcatgtt
cagcggattagtgtagggctgcctaaaaatattcataaagaagagcttcgtagtttaggg
ttagtcggcctttacgatgcgttggaaaagtttgattacggtagagacttgaagtttgat
acatatgcgtcttttcgaattcgaggggcgataatagatggacttcgtaaagaagattgg
ctatcaagaagcgcaagggaaaaaacgaaaagaattgagcaagcaacggaagcacttgaa
caaagatacttgcgtagagttgcaccaagtgaagttgcaaaagaagtaggcatgacagaa
gcagatgtcgttcatacgatgaatgaaggcttcttagctaacgttttgtcaatggaagaa
cagccaaaagagtatgaagatggagaacaaaaatatacgattaaagatgaaaaaatgctc
tctcctgaagaggagctaattaacgatgaacgatatcaagagcttgctgaagttatcgag
cagctaaatgagaaagaacagctcgttgtttcattattctataaagaagagctgactttc
acagagatcgcacagctgttagggctatctacttcacgtatttctcaaattcattcgaaa
gcgctgtttaaaatgcgtacgagtttaagtaaaataatttag
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