KEGG   Bacillus megaterium WSH-002: BMWSH_1060
Entry
BMWSH_1060        CDS       T01890                                 
Symbol
sigD
Name
(GenBank) RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
bmh  Bacillus megaterium WSH-002
Pathway
bmh02020  Two-component system
bmh02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bmh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BMWSH_1060 (sigD)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BMWSH_1060 (sigD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmh03021]
    BMWSH_1060 (sigD)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:bmh02035]
    BMWSH_1060 (sigD)
Transcription machinery [BR:bmh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BMWSH_1060 (sigD)
Bacterial motility proteins [BR:bmh02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    BMWSH_1060 (sigD)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_5 UPF0175 Dbl7 HTH_Tnp_ISL3 HTH_IclR HTH_24 UPF0122 KORA MarR_2 YihI
Other DBs
NCBI-ProteinID: AEN87944
UniProt: A0A8D3WYS0
LinkDB
Position
1078365..1079126
AA seq 253 aa
MKSIQEVEEHKIWQEWIETRDSHAGNMLVKKYMPLVNYHVQRISVGLPKNIHKEELRSLG
LVGLYDALEKFDYGRDLKFDTYASFRIRGAIIDGLRKEDWLSRSAREKTKRIEQATEALE
QRYLRRVAPSEVAKEVGMTEADVVHTMNEGFLANVLSMEEQPKEYEDGEQKYTIKDEKML
SPEEELINDERYQELAEVIEQLNEKEQLVVSLFYKEELTFTEIAQLLGLSTSRISQIHSK
ALFKMRTSLSKII
NT seq 762 nt   +upstreamnt  +downstreamnt
ttgaaaagtatacaagaagttgaagaacataaaatttggcaggaatggatagagacgaga
gactcacatgcgggaaacatgcttgtgaaaaagtatatgccgcttgttaactatcatgtt
cagcggattagtgtagggctgcctaaaaatattcataaagaagagcttcgtagtttaggg
ttagtcggcctttacgatgcgttggaaaagtttgattacggtagagacttgaagtttgat
acatatgcgtcttttcgaattcgaggggcgataatagatggacttcgtaaagaagattgg
ctatcaagaagcgcaagggaaaaaacgaaaagaattgagcaagcaacggaagcacttgaa
caaagatacttgcgtagagttgcaccaagtgaagttgcaaaagaagtaggcatgacagaa
gcagatgtcgttcatacgatgaatgaaggcttcttagctaacgttttgtcaatggaagaa
cagccaaaagagtatgaagatggagaacaaaaatatacgattaaagatgaaaaaatgctc
tctcctgaagaggagctaattaacgatgaacgatatcaagagcttgctgaagttatcgag
cagctaaatgagaaagaacagctcgttgtttcattattctataaagaagagctgactttc
acagagatcgcacagctgttagggctatctacttcacgtatttctcaaattcattcgaaa
gcgctgtttaaaatgcgtacgagtttaagtaaaataatttag

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