Bacillus megaterium WSH-002: BMWSH_1079
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Entry
BMWSH_1079 CDS
T01890
Symbol
truB
Name
(GenBank) TRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bmh
Bacillus megaterium WSH-002
Brite
KEGG Orthology (KO) [BR:
bmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmh03016
]
BMWSH_1079 (truB)
Enzymes [BR:
bmh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BMWSH_1079 (truB)
Transfer RNA biogenesis [BR:
bmh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BMWSH_1079 (truB)
Prokaryotic type
BMWSH_1079 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DUF6892
Motif
Other DBs
NCBI-ProteinID:
AEN87963
UniProt:
A0A8D4BLT9
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All DBs
Position
1098594..1099511
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AA seq
305 aa
AA seq
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MDGVLVLHKPAGLTSHDCVFKVRKLLRTKKVGHTGTLDPDVTGVLPICIGRATKIVEYLT
GATKTYEGEVTLGFSTTTEDSSGEVVEEKKVADSFSRAQIEEVLSSMTGELQQVPPMYSA
VKVKGKKLYEYARQGIEVERPVRTIHIYNFELLDNRATFEGEQISFKFRVTCSKGTYVRT
LAVMIGEALGYPSHMSYLQRTGSGQFSLEDCMTFEDIERAVEEETINEKLHSIEEALNHL
PKLQISDTLAEKVKNGAVLPCTEDEELKKEPFFLMINSAGKCLAIYAQHPTKKHLMKPVK
VLAID
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggacggtgttttagttttacataaaccagctggcctgacttcgcacgactgtgtgttt
aaagtccgaaagctgcttcgcactaaaaaagtagggcatacaggcacattagacccagac
gttacaggggtattacctatttgtatcggtagagctaccaaaattgtagagtatctaaca
ggagctactaaaacctatgaaggagaagtgacactcggattttctacaacaacagaagat
tcttcgggagaggttgtagaagaaaagaaagtagcagattctttttcgcgtgctcaaatc
gaagaagtgctgtcttcgatgacgggagaacttcagcaagtgcctccaatgtactccgcg
gtaaaagtcaaaggtaaaaagctatatgaatatgcaaggcaaggaatcgaagtagagcgc
cctgtgagaaccattcatatttacaactttgaactgctggataatcgcgctacatttgag
ggagaacaaatttccttcaaattccgcgtaacgtgcagcaaaggtacatatgtgcgaacg
cttgctgtgatgattggagaagctctgggctatccgtctcatatgtcttatttgcagcga
acgggttccgggcagttttcactggaagattgtatgacatttgaagatattgaacgagcg
gtcgaagaagaaacgatcaatgagaaactgcattccatcgaagaagctcttaatcatttg
ccgaaacttcaaattagtgatacattagcagagaaagtgaaaaacggcgcggtattgccg
tgtacggaagatgaagagttaaaaaaagaaccattctttttaatgataaattctgcaggc
aagtgcttagcgatttatgctcagcacccaacaaaaaaacatttaatgaagccggttaaa
gtgttggcaatcgactag
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