Bacillus megaterium WSH-002: BMWSH_1345
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Entry
BMWSH_1345 CDS
T01890
Symbol
yvgS
Name
(GenBank) Helicase IV
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bmh
Bacillus megaterium WSH-002
Pathway
bmh03420
Nucleotide excision repair
bmh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BMWSH_1345 (yvgS)
03430 Mismatch repair
BMWSH_1345 (yvgS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmh03400
]
BMWSH_1345 (yvgS)
Enzymes [BR:
bmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BMWSH_1345 (yvgS)
DNA repair and recombination proteins [BR:
bmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BMWSH_1345 (yvgS)
MMR (mismatch excision repair)
Other MMR factors
BMWSH_1345 (yvgS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
AAA_30
PhoH
SLFN-g3_helicase
DEAD
NACHT
nSTAND3
CARD_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEN88229
UniProt:
A0A8D3WZC9
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All DBs
Position
1375608..1377926
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AA seq
772 aa
AA seq
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MKDKNLTEEQQRVDWVVEEISQKAEKIGKSVGNVKGEIVDLRSTFWDDVTVNMDEPDDVI
ETFTSIKQQAELLAEREITHRQAYDQLKTLKKLTQSPYFGRFDFIENGEKEAEAIYVGVG
SLMDQKDEEFLIYDWRAPISSLYYDYSPGKAQYETPGEAIKGEMKLKRQFIIENSVIKSM
FDTGITIRDELLQEVLGHNASSQMKSIVATIQKEQNQIIRNEKNKVLIVQGVAGSGKTSA
ALQRVAYLLYHHRKQLTAENMMLFSPNPLFNSYVSTVLPELGEDNMKQTTFQQYADGRLG
NEFEVEDLFVQIEYLLTEKDAATKKQKMQEIRYKASREFKKQVDAYIEELSTKDIIFKNI
KFRGEIVLSARRLLSYFYSLDTGISIPNRMQLVAEWALKLINQLEKLERKKDWVQEEIQL
LEKEDYVEAYQHLQKKEGYTESSFDDFDREQAYLAKAVVAKKIKFIKQAIKQLKFIDIRR
IYMQLFERNHLFSHVEGWEDTAKNTVQRVINMKLSYEDVTPYLYIQDQIEGRKANPVIRY
LFIDEAQDYSPFQLAFLKELFPHARMTLLGDLNQAIYAHALNAPTILSSELYEEKEAETL
TLTRSYRSTRQIVEFSRDMVANGHLIDPFNRNGAKPTVTAAGDVKELHEAIINKINELKQ
RNYKTIAIIAKTAEESRQAFQALPEAMAARLLTKETSSFEKGMLVLPAYLAKGIEFDAVI
IYNASSECYQDEYERNLFYTACTRAMHELHLFSLGEISPFISNKETYEYHGK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagataaaaatttaacagaagaacagcagcgagttgattgggtagtagaagaaatc
agccaaaaagctgaaaagataggcaaaagcgtaggaaacgtaaaaggtgaaattgtcgat
ttgcgaagcacgttttgggacgatgttacggttaatatggatgagccagatgacgtaatc
gagacatttacgagcattaagcagcaggcagaacttttagctgaacgtgaaattacccat
agacaagcgtatgatcaattaaaaacattaaaaaaactaacgcaatccccttattttggg
cgttttgattttatagaaaatggtgaaaaagaagcggaagctatttatgtaggcgtcggc
tccttaatggatcaaaaagatgaagagtttttaatttatgattggcgtgcgccgatttcg
agtctttattatgattattcaccaggaaaggcgcagtacgaaacgccaggtgaagcgatt
aaaggcgagatgaagctaaagcgtcagtttattattgaaaatagcgtaattaaaagtatg
tttgatacaggaattaccattcgagacgagctgcttcaagaagtgctcgggcacaatgca
agtagtcaaatgaaaagtattgtagcgactattcaaaaagaacaaaaccaaattattcga
aatgaaaaaaataaagtgctgattgttcaaggggtagcagggagtggtaaaacgtcggcg
gctcttcagcgtgtggcttatcttctctatcatcaccgaaagcagctgactgcagaaaac
atgatgctgttttcaccaaatccgctttttaacagctacgtttcaaccgttcttccggag
cttggagaagacaacatgaaacaaacaacgtttcagcaatatgctgatggacggttagga
aacgagtttgaagtggaggatttgttcgttcaaatcgaatatttgctaacggagaaagat
gccgcaacaaaaaaacaaaaaatgcaggaaatccgctacaaagcaagccgtgaatttaaa
aagcaggtagatgcgtatatcgaagagctgtctactaaagacatcatttttaaaaacatt
aagtttcgcggcgaaatcgtgttatctgctcggcgtctgctgtcttatttctactcgctt
gatacgggaatttccatccctaacagaatgcagcttgtagccgagtgggcgcttaaactc
attaatcagcttgaaaaacttgagcgtaaaaaagattgggttcaagaagaaattcagctt
ttagaaaaagaagattatgtagaggcctatcagcacctgcagaaaaaggaaggctatacg
gaaagctcatttgatgatttcgatcgggaacaagcgtatttagccaaagccgttgtagct
aagaaaataaaatttattaagcaggccatcaagcagcttaaatttatcgacattcgccgt
atctatatgcagctgtttgaaagaaatcatcttttttcacacgtagaagggtgggaagac
actgctaaaaacacggtacaaagagtcataaacatgaagctgtcttatgaagacgtaacg
ccttatttatatatccaagatcaaattgaagggcgcaaagctaaccctgtcattcgctat
ttgtttattgatgaagcacaagattattcaccgtttcagctagcatttttaaaagagctg
tttccgcatgccaggatgacgctgcttggagacttgaatcaagcgatctatgcgcacgcc
ttgaacgcaccgaccattctttcaagcgagctgtatgaagagaaagaagcagaaacgctg
actcttacaagaagctatcgctcaacacgtcaaattgtcgagttttcaagggatatggtc
gcaaacggccatttaatcgatccgtttaatcgaaacggagcgaagccgaccgtgacggct
gcaggtgacgtcaaagagctgcatgaggcaatcataaacaaaattaatgaattgaagcag
cgcaactataaaacgattgctattattgctaaaacagctgaggaaagtcgtcaagcattc
caagctttgcctgaagcgatggctgcaagactgctgacaaaagaaacaagttcatttgaa
aaaggcatgcttgtcctgccagcttacttagcaaaaggaattgaatttgatgctgtcatc
atttataatgcgtcgagtgaatgttaccaagatgaatatgagcggaatttattttataca
gcatgcacaagagcgatgcatgagctccacctgttctcacttggtgaaattagcccgttt
atatcaaataaagaaacttatgaataccacggtaaataa
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